Gene YPK_1536 details

Gene Information

• Locus tag: YPK_1536
• ID: 6090613
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1699614
• End bp: 1700186
• Gene Length: 573 bp
• Protein Length: 190 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 641596606
• Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
• Protein accession: YP_001720282
• Protein GI: 170023777
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase
• TIGRFAM ID: [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGAC TTATTATTGG CATTAGTGGT GCAAGTGGTG CCATTTATGG TGTGCGGCTG 
TTACAGGTGC TGCAACATGT CGAAGGCGTG GAAACCCATT TGATTATCAG CAATGCTGCC 
CGTCAAACAC TGGCGCTCGA AACCGACTAC AGCGTCAAGG ACGTCCAAGA ATTTGCCGAT 
GTGGTCCATG ATTTTCGGGA CATTGCGGCT TGTATCTCTT CTGGTTCATT TAAGACCGAT 
GGCATGGTTA TTTTACCTTG CTCCATCAAA ACACTGTCTG GCATTGTCCA TAGTTATACC 
GATGGTTTAT TGACCCGCGC TGCCGATGTG ATCCTTAAAG AACGTCGCCG TTTGGTGCTT 
TGTGTCCGCG AAACCCCCCT GCATTTAGGC CACCTCCGCT TAATGGTGCA AGCCGCCGAA 
TTAGGTGCTG TGATTATGCC GCCAATGCTT GCGTTCTATC ATCAGCCACA AACTATTCAG 
GACATTATTG ATCAAACAGT TAATCGCATC ATCGATCAGT TTGATATTGA GTTACCTAAA 
GATCTGTTTA CGCGCTGGCA AGGTAAAAAC TAA 

 

Protein sequence

MKRLIIGISG ASGAIYGVRL LQVLQHVEGV ETHLIISNAA RQTLALETDY SVKDVQEFAD 
VVHDFRDIAA CISSGSFKTD GMVILPCSIK TLSGIVHSYT DGLLTRAADV ILKERRRLVL 
CVRETPLHLG HLRLMVQAAE LGAVIMPPML AFYHQPQTIQ DIIDQTVNRI IDQFDIELPK 
DLFTRWQGKN