Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1533 |
Symbol | |
ID | 6090600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1696249 |
End bp | 1696986 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641596603 |
Product | hypothetical protein |
Protein accession | YP_001720279 |
Protein GI | 170023774 |
COG category | [S] Function unknown |
COG ID | [COG3147] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0478054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAAGTC AGTTCCAGAA CCGTTTAGTC GGGACCATTA TTTTAGTTGC CTTAGGTGTG ATTGTGTTAC CGGGGCTACT GGATGGCAAA AAGAAGCACT ATGAGGATGA GTTTGCTGCT ATTCCGTTAG TGCCAAAACC AGGGGATAGC CAAGAGATTG ATGTGGTTCC GCCGCTCAAT CAGCCTCTTC CCATTACGCC GCCCGAAGGT GCAGCACAAG CGGTAGGCGC CGAACTCAAC GATGATTCGG TTTCTCAGGC GGCTAATGAT GCCGGCAATC TTGCCGTTGA ACCTACGATT GTGGCACCGC CACCAATCCA GAGTAAGCCG GTTGAGGTAA AACCTACCGT GACGAAGCCG GTAGACGTTA AGCCGACAGA AACCAAGCCG ACAGAAACCA AGCCGATAGA AACAAAACCA GCAGAGAAAA AACCGCTGGA AGTGAAACCT AAGCCAGAAA TCAAACCGCC GGTGGAAGAA AAAGCGCCAG TGGGGCAGGC TTATGTTGTC CAACTGGGGG CGCTAAAAAA TGCAGCCAAA GTAAATGAGA TTGTCGCGAT GCTGCGGTTG TCGGGGCATC GGGCGTTCAC TGTACCCGCC ACGCCGGTTC AGGGTGAGAT AACCCGGTTA TATGTCGGGC CGGATGCATC AAAACAGAAA TTACAATCCG CGTTACCTGA GCTTAATGCA TTAAGTGGTC TGAATGGGCA AGTTAAGCCT TATACAACGT CGCGTTAG
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Protein sequence | MASQFQNRLV GTIILVALGV IVLPGLLDGK KKHYEDEFAA IPLVPKPGDS QEIDVVPPLN QPLPITPPEG AAQAVGAELN DDSVSQAAND AGNLAVEPTI VAPPPIQSKP VEVKPTVTKP VDVKPTETKP TETKPIETKP AEKKPLEVKP KPEIKPPVEE KAPVGQAYVV QLGALKNAAK VNEIVAMLRL SGHRAFTVPA TPVQGEITRL YVGPDASKQK LQSALPELNA LSGLNGQVKP YTTSR
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