Gene YPK_1533 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1533 
Symbol 
ID6090600 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1696249 
End bp1696986 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content51% 
IMG OID641596603 
Producthypothetical protein 
Protein accessionYP_001720279 
Protein GI170023774 
COG category[S] Function unknown 
COG ID[COG3147] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0478054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAAGTC AGTTCCAGAA CCGTTTAGTC GGGACCATTA TTTTAGTTGC CTTAGGTGTG 
ATTGTGTTAC CGGGGCTACT GGATGGCAAA AAGAAGCACT ATGAGGATGA GTTTGCTGCT
ATTCCGTTAG TGCCAAAACC AGGGGATAGC CAAGAGATTG ATGTGGTTCC GCCGCTCAAT
CAGCCTCTTC CCATTACGCC GCCCGAAGGT GCAGCACAAG CGGTAGGCGC CGAACTCAAC
GATGATTCGG TTTCTCAGGC GGCTAATGAT GCCGGCAATC TTGCCGTTGA ACCTACGATT
GTGGCACCGC CACCAATCCA GAGTAAGCCG GTTGAGGTAA AACCTACCGT GACGAAGCCG
GTAGACGTTA AGCCGACAGA AACCAAGCCG ACAGAAACCA AGCCGATAGA AACAAAACCA
GCAGAGAAAA AACCGCTGGA AGTGAAACCT AAGCCAGAAA TCAAACCGCC GGTGGAAGAA
AAAGCGCCAG TGGGGCAGGC TTATGTTGTC CAACTGGGGG CGCTAAAAAA TGCAGCCAAA
GTAAATGAGA TTGTCGCGAT GCTGCGGTTG TCGGGGCATC GGGCGTTCAC TGTACCCGCC
ACGCCGGTTC AGGGTGAGAT AACCCGGTTA TATGTCGGGC CGGATGCATC AAAACAGAAA
TTACAATCCG CGTTACCTGA GCTTAATGCA TTAAGTGGTC TGAATGGGCA AGTTAAGCCT
TATACAACGT CGCGTTAG
 
Protein sequence
MASQFQNRLV GTIILVALGV IVLPGLLDGK KKHYEDEFAA IPLVPKPGDS QEIDVVPPLN 
QPLPITPPEG AAQAVGAELN DDSVSQAAND AGNLAVEPTI VAPPPIQSKP VEVKPTVTKP
VDVKPTETKP TETKPIETKP AEKKPLEVKP KPEIKPPVEE KAPVGQAYVV QLGALKNAAK
VNEIVAMLRL SGHRAFTVPA TPVQGEITRL YVGPDASKQK LQSALPELNA LSGLNGQVKP
YTTSR