Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1526 |
Symbol | |
ID | 6087649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1688592 |
End bp | 1689377 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641596596 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001720272 |
Protein GI | 170023767 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAGAAC CTGATTTTCC TGTAGTCACC TCAAGGATCC CACAGACCTT GTCCTTTCGC TGTGAAGCGT TTAATGCCAA TACCGAATTT TTGCCTCACA CACATCCTTT TGGACAATTG ATATGCGTTA AATCCGGTGT TCTGGCCATG AGCATTGGTG GTCAGCGTTT CCTTGCACCA CCTGAATTTA TTGTCTGGGT CCCCGCGGGC ATGGAGCACT CTAGCTATAA TCGTAAACCC ATGCATTTTC GTGCCATTGA TATTGCGCTG GATTTTTGTA CCGAACTCCC GGCGTCACCT GGACTGATGA ATGTCAGCCC CATCTTTAAT GCCATTGTGG AGGATTGTTT TACACGTGAT TTATTGATGC CAGAAACTCA GCAGGATAGA CGTCTGGCCC ATGTATTGAT TGATCAACTC AAGGTGTCAC CGGTGCAGCG GACTTATCTG CCAACTTCAC AAGATAAACT GTTGTCGCCT ATTTTAGCCG CATTGGAGCG CTGCCCTGCG GATAGCACCT CGCTGGCACT TTGGGCCAAG CGGGTATATA CCACCGAACG TACTTTATCC CGCCGTTGCC AGCAGGAGCT TGGTATGGCA TTTAGCGAAT GGCGGCAGCG CTTACGTTTT TTACATGCCA TCTCATTGTT AGAACAGGGG AAAACGGTAA ACAGTGTGGC ATTAGATGTC GGTTATAGCT CCGCCTCTGC TTTTATCGCC ATGTTTCAGC AAATATCGGG TACCACGCCT GAGCGTTTCC GGCGGGGCAA TAGTGGCTTA TACTAA
|
Protein sequence | MTEPDFPVVT SRIPQTLSFR CEAFNANTEF LPHTHPFGQL ICVKSGVLAM SIGGQRFLAP PEFIVWVPAG MEHSSYNRKP MHFRAIDIAL DFCTELPASP GLMNVSPIFN AIVEDCFTRD LLMPETQQDR RLAHVLIDQL KVSPVQRTYL PTSQDKLLSP ILAALERCPA DSTSLALWAK RVYTTERTLS RRCQQELGMA FSEWRQRLRF LHAISLLEQG KTVNSVALDV GYSSASAFIA MFQQISGTTP ERFRRGNSGL Y
|
| |