Gene YPK_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1514 
Symbol 
ID6088773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1675831 
End bp1676916 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content52% 
IMG OID641596584 
Productchorismate synthase 
Protein accessionYP_001720260 
Protein GI170023755 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0082] Chorismate synthase 
TIGRFAM ID[TIGR00033] chorismate synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.85122 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGGGA ACAGTATTGG GCAGTTTTTC CGCGTCACCA CTTTTGGTGA ATCTCACGGT 
ATCGCCCTAG GATGCATTAT TGATGGTGTA CCACCGGGCA TTCCGATTAC CGAGGCTGAT
ATTCAGTTGG ATCTTGACCG TCGCCGTCCG GGGACTTCTC GTTATACCAC TCAGCGCCGT
GAGCTGGATC AAGTTCGCAT TTTATCCGGC GTATTTGAGG GCGTCACTAC GGGGACCAGT
ATCGGGTTAA TGATTGAAAA TACGGATCAG CGTTCGCAAG ATTACAGCGC AATTAAAGAT
GTGTTCCGCC CCGGTCATGC TGATTATACC TATGAGCAAA AATACGGTGT ACGGGATTAC
CGTGGTGGTG GCCGCTCTTC AGCCCGCGAA ACCGCGATGC GGGTGGCGGC GGGCGCTATT
GCTAAAAAGT ATTTAGCACA AAAATTTGGT GTACAGGTGC GTGGTTATCT GGCGCAAATG
GGGGATGTTA GTTGTGATTT GCTCGATTGG GATTTGGTCG AGCAAAATCC ATTCTTTTGC
CCCGATGCCA GCAAACTGGA GCCGCTGGAT GCCCTAATGC GTGAGCTGAA AAAAGCCGGT
GACTCCATTG GTGCCAAAAT CACCGTCGTC GCTGAAAATG TCCCCGTAGG TTTAGGTGAG
CCGGTATTTG ATCGTTTGGA TGCGGATCTT GCTCATGCAT TGATGAGTAT CAACGCGGTA
AAAGGGGTGG AAATTGGCGA TGGTTTTGCT GTCGTCACTA AGCGTGGCAG TGAAAACCGT
GATGAAATTA CTCCGCAGGG CTTCCAAAGT AATCATGCTG GCGGCATTTT AGGGGGGATT
AGCAGCGGGC AGCCGGTTGT TGCTCACATT GCATTAAAAC CCACCTCCAG CATTATGGTT
CCGGGGCAAA CTATCAATCG GCAAGGAGAA GCGGTTGAAA TGGTGACCCG AGGGCGTCAT
GACCCGTGTG TGGGTATCCG GGCGGTACCT ATTGCAGAAG CGATGATGGC TATCGTACTT
ATGGATCACC TACTGCGCCA GCGCGCGCAG TGCGGCGATG TGGCTTCAGA CGTTCCGCGC
TGGTAG
 
Protein sequence
MAGNSIGQFF RVTTFGESHG IALGCIIDGV PPGIPITEAD IQLDLDRRRP GTSRYTTQRR 
ELDQVRILSG VFEGVTTGTS IGLMIENTDQ RSQDYSAIKD VFRPGHADYT YEQKYGVRDY
RGGGRSSARE TAMRVAAGAI AKKYLAQKFG VQVRGYLAQM GDVSCDLLDW DLVEQNPFFC
PDASKLEPLD ALMRELKKAG DSIGAKITVV AENVPVGLGE PVFDRLDADL AHALMSINAV
KGVEIGDGFA VVTKRGSENR DEITPQGFQS NHAGGILGGI SSGQPVVAHI ALKPTSSIMV
PGQTINRQGE AVEMVTRGRH DPCVGIRAVP IAEAMMAIVL MDHLLRQRAQ CGDVASDVPR
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