| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1509 |
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| Symbol | fadJ |
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| ID | 6091346 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1670269 |
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| End bp | 1672593 |
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| Gene Length | 2325 bp |
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| Protein Length | 774 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641596579 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001720255 |
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| Protein GI | 170023750 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02440] fatty oxidation complex, alpha subunit FadJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.807341 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGG AAAATATCGT TACCCGTGAA AATACAGCTG TCAGTGAAAA TGCAGTCAGT
GAACCTACAG TGAATAATGA TGTGGGCGCA TCGGCCACGA ATTCAGTTAC CCATCCCGCA
TTTACCCTCA ACGTAAGGCC GGACAATATT GGCATTATCA CCATTGATGT TGTTGGTGAC
AAAGTGAATA CCCTAAAGGC TGAATTTGCT GATCAAATTG CCACTATATT GCAACAAGCG
CACGCTCTAC CAAAATTACA GGGACTCGTC ATTGTTTCTG GCAAACCAGA CTCCTTCATT
GCCGGTGCGG ATATCACGAT GATCGCGGCT TGTCGTACCG CTCACGACGC CCGCGTATTA
GCACAAAAAG GCCAATCAAT TTTGGCGCAA ATTGCCGCTT TCCCTGTGCC GGTTGTGGCT
GCGATTCATG GCGCTTGTCT GGGGGGAGGG CTAGAGCTGG CGCTGGCTTG CCATAGCCGC
ATATGTTCTC TGGATGATAA AACCGTTCTC GGGCTACCGG AGGTGCAACT GGGGTTACTG
CCTGGCTCCG GCGGGACGCA ACGTCTGCCG CGTTTAGTGG GGGTCAGTAA AGCACTGGAT
ATGATATTGA CCGGTAAACA GATACGGCCC CGTCAGGCAC TAAAAATGGG GCTGGTGGAT
GATGTTGTGC CACGCGATAT CTTATTGGAT GTGGCGATTC AGCGCGCGAA AGCGGGGTGG
CTTAATCGAC GAGCATTACC ATGGCAGGAG CGTTTACTCA GTGGGTCGTT GGGTAAAGCT
TTATTATTCC GTATTGTCCG TAAAAAAACG TTAGCTAAAA CGCGGGGGCA CTACCCGGCG
GCTGAACGTA TTATTGATGT GGTGCGTAAA GGATTAGATC AGGGCGGGCC AAGTGGTTAT
GAGGCAGAAG CCAGAGCATT TGGCGAGTTG GCGATGTCGC CTCAGTCAGC CGCATTACGC
AGCCTATTTT TCGCCACGAC GTCACTGAAA AAAGAGACCG GAAGTGCAGC CACAGCGCGT
GCAATTCATC GGGTCGGCGT ATTGGGCGGT GGCTTGATGG GCGGAGGTAT TGCCAACGTA
ACGGCTACCC GAGCGGGCTT GCCAGTGCGT ATCAAAGATA TCAATCCGCA AGGAATTAAT
CAGGCGCTGA AATATACCTG GGACGCATTG GGTAAACGGG TTCGTAGTAA GCGGATGCGC
CCAACTGAAC AGCAGCGGCA GATGATGTTG ATCTCTGGTA GTACGGATTA CCGTGGTTTT
GAACGTGTCG ATATTGTGGT GGAAGCGGTA TTTGAGGATT TATCACTGAA GCAGCAAATG
GTTGCTGACA TCGAACGATT TGGTGCCGCC CATACTATTT TTGCCTCCAA TACATCATCA
CTCCCCATCA GCCAGATTGC TGCTTTGGCG CAACGGCCAG AGCAGGTTAT TGGCCTGCAC
TATTTTAGTC CAGTAGATAA AATGCCACTG GTTGAAGTCA TCCCCCATGA AAAAACCAGT
GAAGAGACCA TCGCTACCAC CGTTGCTTTA GCCCGGAAAC AGGGTAAAAC AGCCATTGTG
GTGGCTGATC GCGCTGGGTT CTATGTAAAC CGCATTTTGG CACCTTATAT TAATGAAGCT
GCCCGTTGCC TGCTCGACGG AGAGCCTATC GAATCAGTTG ATAACGCGTT GGTCGATTTT
GGTTTCCCCG TAGGCCCCAT GATGCTGCTT GATGAGGTTG GGATTGATGT TGCGACCAAA
ATAATGCCGA TTCTGGTCGA GCAATTAGGG CCGCGTTTTG CTGCGCCCCC GTCATTTGAC
GTTATTTTGA AGGATGGACG TAAAGGGCGC AAAAATGGCC GTGGCTTTTA TTTATATTCA
AACCCCACAA AAAATTCATC TCCAACAAAA AATGGGAATT CTCCGGCGAA GCGTAATAGC
TTTAAGTGGA GAAAAAACAA AGTAAAACCA GTCGATGCCA GTATCTATAC CTTGTTGGGG
GTGACACCTA AAGCCCATCT TGGTGCAGGC GTGATTACTC AACGTTGTAC CATGCTGATG
TTGAACGAAG CGGTACGCTG TCTGGATGAA TCGATCATTC GTAACCCGCG CGATGGTGAT
ATTGGTGCAG TGTTTGGGAT CGGTTTTCCG CCTTTCCTCG GTGGTCCGTT CCGCTATTTG
GATAGCCTGG GAGCCGATAA GGTGGTACAA GCACTCAGAT TATTGGTACA GCAATACGGT
GAGCGTTTCG AACCTTGCCA GCGGTTGGTA ACAATGGCTG AACAACAACA ACAATTCTAT
CCCGTGGACG CCAATATAGA TGAGGTGACG GACGTGGCAA GCTGA
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| Protein sequence | MSKENIVTRE NTAVSENAVS EPTVNNDVGA SATNSVTHPA FTLNVRPDNI GIITIDVVGD
KVNTLKAEFA DQIATILQQA HALPKLQGLV IVSGKPDSFI AGADITMIAA CRTAHDARVL
AQKGQSILAQ IAAFPVPVVA AIHGACLGGG LELALACHSR ICSLDDKTVL GLPEVQLGLL
PGSGGTQRLP RLVGVSKALD MILTGKQIRP RQALKMGLVD DVVPRDILLD VAIQRAKAGW
LNRRALPWQE RLLSGSLGKA LLFRIVRKKT LAKTRGHYPA AERIIDVVRK GLDQGGPSGY
EAEARAFGEL AMSPQSAALR SLFFATTSLK KETGSAATAR AIHRVGVLGG GLMGGGIANV
TATRAGLPVR IKDINPQGIN QALKYTWDAL GKRVRSKRMR PTEQQRQMML ISGSTDYRGF
ERVDIVVEAV FEDLSLKQQM VADIERFGAA HTIFASNTSS LPISQIAALA QRPEQVIGLH
YFSPVDKMPL VEVIPHEKTS EETIATTVAL ARKQGKTAIV VADRAGFYVN RILAPYINEA
ARCLLDGEPI ESVDNALVDF GFPVGPMMLL DEVGIDVATK IMPILVEQLG PRFAAPPSFD
VILKDGRKGR KNGRGFYLYS NPTKNSSPTK NGNSPAKRNS FKWRKNKVKP VDASIYTLLG
VTPKAHLGAG VITQRCTMLM LNEAVRCLDE SIIRNPRDGD IGAVFGIGFP PFLGGPFRYL
DSLGADKVVQ ALRLLVQQYG ERFEPCQRLV TMAEQQQQFY PVDANIDEVT DVAS
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