Gene YPK_1500 details

Gene Information

• Locus tag: YPK_1500
• ID: 6090051
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1661031
• End bp: 1661525
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641596570
• Product: cytochrome c-type biogenesis protein CcmE
• Protein accession: YP_001720246
• Protein GI: 170023741
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG2332] Cytochrome c-type biogenesis protein CcmE

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACCCAC GTAGAAAAAG TCGGCTCTAT CTGGCGATGG TGGTTCTGAT CGGCATCTCT 
TTGACCACCA CGTTGGTGCT GTATGCGCTG CGTTCAAATA TCGATCTATT TTATACCCCC 
GGCGAAATTT TACAGGGCAA AGGCGAACGC CATGAGAAAC CAGCAATAGG CCAACGTTTA 
CGTATTGGCG GCATGGTGAT GCCGGGATCC GTGCAACGCG ATGCAAAGAC TTTGGAAATG 
AGTTTTCAAG TTTATGATGC GCGTGGCGCT GTCACCGTGA CATACACCGG TATTCTGCCG 
GATCTGTTTA GGGAAGGGCA GGGGGTCGTG GCGCAAGGGG TATTTGCTGA AGGTAATACC 
GTCCATGCCA AAGAAGTGCT GGCAAAGCAT GATGAAAAAT ACACGCCACC TGAAGTTGAA 
GAGGCAATGA AAGAGAACCA CTCTCGCCCG GCGGCCGCTT ATCGTGGCAC TAATACGACG 
GGTAATGCCT TATGA 

 

Protein sequence

MNPRRKSRLY LAMVVLIGIS LTTTLVLYAL RSNIDLFYTP GEILQGKGER HEKPAIGQRL 
RIGGMVMPGS VQRDAKTLEM SFQVYDARGA VTVTYTGILP DLFREGQGVV AQGVFAEGNT 
VHAKEVLAKH DEKYTPPEVE EAMKENHSRP AAAYRGTNTT GNAL