Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1497 |
Symbol | |
ID | 6087549 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1659276 |
End bp | 1659935 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641596567 |
Product | heme exporter protein CcmB |
Protein accession | YP_001720243 |
Protein GI | 170023738 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTATCA GCGTGTTGCG CCGTGAATTA AAAATAGCCT TTAGAAAAGG TGCGGAAATC GTTAACCCGC TGTGGTTCTT TTTGATCGTT ATTACGCTGT TCCCATTGGG GATAGGCCCA GAGCCACAAT TGCTGGCTCG CATTGCACCG GGCATCGTGT GGGTAGCGGC TTTGTTGGCC TCGTTACTCT CGTTGGAGCG CTTATTCCGT GATGATTTTT ACGATGGCTC CCTTGAACAG TTGCTGTTAT TGCCTACACC ACTCCCCCTC ACCGTCTTAG GCAAAGTATG TGCTCACTGG GTCGTCACTG GGCTGCCTTT ATTGGTGTTA TCACCGTTGG TCGCTTTATT ACTTTCTCTG GACGTCAATA CTGCTATCGC GATGGGGCTG ACGCTCCTGC TTGGGACACC AACACTGAGT TTTATCGGTG CTATCGGCGT GGCGTTGACG GTGGGGTTAC GTAAAGGCGG GGTGCTGTTG AGTCTATTGG TTTTGCCGCT GTATATCCCG GTTTTAATCT TTGCGACGGC GGCCATTGAT GCCGCGTCAA TGGCGATGCC AATCGACGGT TATCTGGCTA TTTTGGGTGC GATGTTGGCA GGGAGTGTGA CACTTGCGCC TTTTGCGACG GCAGCAGCGT TACGGGTGAG CATACAGTAA
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Protein sequence | MFISVLRREL KIAFRKGAEI VNPLWFFLIV ITLFPLGIGP EPQLLARIAP GIVWVAALLA SLLSLERLFR DDFYDGSLEQ LLLLPTPLPL TVLGKVCAHW VVTGLPLLVL SPLVALLLSL DVNTAIAMGL TLLLGTPTLS FIGAIGVALT VGLRKGGVLL SLLVLPLYIP VLIFATAAID AASMAMPIDG YLAILGAMLA GSVTLAPFAT AAALRVSIQ
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