Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1494 |
Symbol | |
ID | 6090145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1656579 |
End bp | 1657121 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641596563 |
Product | LemA family protein |
Protein accession | YP_001720240 |
Protein GI | 170023735 |
COG category | [S] Function unknown |
COG ID | [COG1704] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.389059 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAATTT ATATCGGTTT AGCTGTTGTT GCCTTAATAC TTATTTGGGC GGTCATGACC TATAACCGCT TTATCTCCCT TCGGCGTTTC AAAGATGAAG CCTGGAGCGA TATTGCGGTA CAACTCAAGC GCCGACACGA TCTGGTTCCC AACCTGCTAA GTCTGGTCAA ACGCTATGCC CAGCACGAAA AAGAACTTCT GGAAGAGATC ACCCGCCAAC GTAGCAACCT TGTTGGTAAT ACCCGCCAAA TTGCCGAAAA TGAGCGAGAA TATTCTGGCA TTCTTGGCCG CGTATTTGCG TTAGCAGAAG CTTATCCCGA TTTAAAAGCC AATGAGAATT TCCTGTCTCT GCAGCAATCC CTCGCTGAAA TAGAAGAACA ACTTCAGATG GCACGTCGTT ATTTTAATGG CACAGTACGG GACTTCAATA TTCTGGTGGA GTCTTTCCCA AGCTTACTGT TAGCCCATTT ATTTAATTTT AAAGCAGATG TATTTTTTGA ACTTGAAAAT CCTGATGAAG CCAAATTACC ACGGATGGAA TAG
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Protein sequence | MEIYIGLAVV ALILIWAVMT YNRFISLRRF KDEAWSDIAV QLKRRHDLVP NLLSLVKRYA QHEKELLEEI TRQRSNLVGN TRQIAENERE YSGILGRVFA LAEAYPDLKA NENFLSLQQS LAEIEEQLQM ARRYFNGTVR DFNILVESFP SLLLAHLFNF KADVFFELEN PDEAKLPRME
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