| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1474 |
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| Symbol | |
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| ID | 6088377 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1629626 |
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| End bp | 1632283 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641596543 |
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| Product | type VI secretion ATPase |
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| Protein accession | YP_001720220 |
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| Protein GI | 170023715 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTATTA CAAGGAAACA TCTCTTCGGC AAGCTGGACG CCACTCTTTT CAAAGGTATT
GAAAGCGCAA CAACGATTTG TAAATTACGC GGCAATCCTT ACGTAGAGTT AGTTCACTGG
TTGAATCAGC TTTGGCATCA GGAAGATAAC GACCTTAAGC AGATTATTCG GTATTTTGCG
GTGGATGTGG ATGCCTTTGA GCGTGAGCTG GCTCAGGCAC TTGCGAAGTT ACCTGTCGGG
GCAACTAGCA TTTCAGATTT TTCGTATCAT ATTGAGTTGG CCACGGAACG GGCTTGGATC
TATGCCAGCC TGGAGTGTTT AGATACCCGT ATCCGGAGTG GACACCTGCT GCTTGCGCTA
TTAACAACAA TGGAACTGCG GAGAGCTTTC TTTGCGATTG CGCCAAGCAT GGAAAAAATT
CCATTAGAGC ATTTAAGCAA AGATTTGAAC TTCATTACGC AGGCATCACC AGAAGCGAAT
GAAGCAGCCA GTGATGGCAG CCCGTTGTAC GATGGAGCTT TACCTGGCGA AGCCAGTAAT
GCCATCGGTG CGGCAAAAAG TGGTGGCACA CTGGCTCAAT ACACCACAGA CCTCACGGCA
TTAGCACGTG AAGGCAAGAT AGATCCGGTA TTGGGACGTA ATCACGAAAT CAACACAATG
GTTGATATTC TCTTGCGCCG TCGGCAGAAC AACCCATTAC TGACCGGTGA CGCAGGGGTG
GGTAAAACCG CCATTGTTGA AGGGCTAGCA TTGGCCATTG CTGCAGGCTC AATGCCGCCA
GCATTAAGCC AGGTAAGCCT GTTGTCATTA GATATTGTGG CGCTCTCAGC GGGTGCCAGC
ATGAAAGGTG AATTTGAAGC GCGCCTGAAG AGTGTCTTGG ATGAAGCAAT CGCGGCAGAA
AAGCCCGTTA TTTTGTTTAT CGATGAAGTC CACACACTTA TTGGCGCGGG TGGCAATGCC
GGGACCGGCG ATGCGGCGAA CTTATTGAAA CCTGCATTGG CGCGTGGCCA ATTACGTACC
ATTGGTGCGA CAACGTGGAG CGAGTTCAAG CGTCACATTG AGAAGGATCC GGCACTCACC
CGTCGTTTCC AAGTACTTCA AGTTGATGAG CCCGATGAGA ACACGGCGAT CTCCATGTTA
CGGGGCCTGA TACCTGCGCT AGAAAAGCAC CATGGCGTGT GGATTATGGA CGAAGCCTTA
CAGGCGGCAG TACGGTTGTC TCATCGTTAT ATCCCTGCGC GTCAGTTGCC GGATAAAGCG
ATAAGTCTGC TTGATACGGC TTGTGCCCGG ATCGCTGTTG CACAGCATTC ACAACCAATA
GAGTTGCAGC ACTTAACCTT CCAGAGTGAG ACCGCGCAAA CTGAGCTGGT TTCCTTAGAG
AAAGCGCGGC ACTTTGGTAA AGCGCAGGAT GCGCGTACTG AGCAGTTGAA AACATCCATT
GCTGAACATG GCGAGGCTGC AGATAAACTT GATCAGCGTT GGCAGGCAGA ACGCGAATTG
GTATCAGCGA TTACGACCAT AAGAACCGCA CTTTATGACT TGGTTTCTCA GCCAGAGCCT
GATGAGGAAA AACGTCGGGC TTATCAAGCG CAATTAGTCC AGTTGGAAGC GCAGCTTTCT
CAGGTTCGCA CTTCACTGCC GTTAGTGCAG ACAGAAGTCA ACGCTGAAGT GATCGCCAGT
ATCGTTGCAG ATTGGACCGG CATCCCGGTT GGGCAAATGC TCAAAGACGA TATTCGGGCG
GTAATGGAGT TGCCACAGCG CCTTGAAGCA CGTGTTATTG GTCAGCCCCA TGCATTGATG
CAACTGGGTG AGAATATTAT GACCGCACGC GCCGGTCTGT CAGACCCAAG GAAACCATTG
GGGGTCTTTA TGTTAGTGGG GCCTTCAGGT GTGGGTAAAA CAGAGACGGC CTTAGCGATT
GCCGAGAGCA TGTATGGTGG TGAACAGAAT ATGATCACTA TCAATATGAG CGAATATCAG
GAATCGCATA CCGTTTCCTC TTTAAAAGGT TCTCCACCGG GATATGTTGG ATACGGTGAA
GGCGGTGTAT TAACGGAAGC CGTGCGCCGT AAGCCATATA GTGTTGTGTT ATTAGATGAA
ATCGAAAAAG CGCACTCTGA TGTACATGAA TTATTCTTCC AAGTGTTTGA TAAAGGCCAA
ATGGAAGATG GTGAAGGGCG CTTTATCGAT TTCAAAAACA CTATTTTGCT GTTAACCAGT
AATGTGGGCA GCGAGTTACT GAGTAACTTA TTAGCTGATC CAGATACTGC ACCGGATCAG
GATGGAATAT TAACTGCGTT ACAACCTGAA TTGCTGAAAG TTTTCCCAGC AGCATTTTTA
GGGCGAGTCA CGGTTATTCC TTATCTTCCG TTACAGCAAG ATGCATTGCA GCACATTGTA
CGGTTACATC TTGACCGGAT TGGCGCTCGT TTATACTCGC AGCATCAATT GACACTGAAA
TACAGTGATG AAGTGGTTGA CGATGTTGTT AGCCGCTGTG CGGTTTCAGA AACCGGTGCA
CGTATGCTGA TCCGTTACAT TGAACAAAAT ATTACGCCAA AAATAGGTAA ATATATTTTA
GGTGATAGTG ATGTGAAGCC TGAGCAAATT ATTTTCGTTC ATAAAAATGA AAATGGATTC
GTGATCGCTT TACAATGA
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| Protein sequence | MAITRKHLFG KLDATLFKGI ESATTICKLR GNPYVELVHW LNQLWHQEDN DLKQIIRYFA
VDVDAFEREL AQALAKLPVG ATSISDFSYH IELATERAWI YASLECLDTR IRSGHLLLAL
LTTMELRRAF FAIAPSMEKI PLEHLSKDLN FITQASPEAN EAASDGSPLY DGALPGEASN
AIGAAKSGGT LAQYTTDLTA LAREGKIDPV LGRNHEINTM VDILLRRRQN NPLLTGDAGV
GKTAIVEGLA LAIAAGSMPP ALSQVSLLSL DIVALSAGAS MKGEFEARLK SVLDEAIAAE
KPVILFIDEV HTLIGAGGNA GTGDAANLLK PALARGQLRT IGATTWSEFK RHIEKDPALT
RRFQVLQVDE PDENTAISML RGLIPALEKH HGVWIMDEAL QAAVRLSHRY IPARQLPDKA
ISLLDTACAR IAVAQHSQPI ELQHLTFQSE TAQTELVSLE KARHFGKAQD ARTEQLKTSI
AEHGEAADKL DQRWQAEREL VSAITTIRTA LYDLVSQPEP DEEKRRAYQA QLVQLEAQLS
QVRTSLPLVQ TEVNAEVIAS IVADWTGIPV GQMLKDDIRA VMELPQRLEA RVIGQPHALM
QLGENIMTAR AGLSDPRKPL GVFMLVGPSG VGKTETALAI AESMYGGEQN MITINMSEYQ
ESHTVSSLKG SPPGYVGYGE GGVLTEAVRR KPYSVVLLDE IEKAHSDVHE LFFQVFDKGQ
MEDGEGRFID FKNTILLLTS NVGSELLSNL LADPDTAPDQ DGILTALQPE LLKVFPAAFL
GRVTVIPYLP LQQDALQHIV RLHLDRIGAR LYSQHQLTLK YSDEVVDDVV SRCAVSETGA
RMLIRYIEQN ITPKIGKYIL GDSDVKPEQI IFVHKNENGF VIALQ
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