| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1467 |
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| Symbol | |
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| ID | 6089195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1619849 |
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| End bp | 1621531 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641596536 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_001720213 |
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| Protein GI | 170023708 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.459953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAAGG TTAAATTGAA TAAAACGCTC TCTCTATTAT GGCTGGCTGC GGTCGGCACC
CTATTGGTGA GTGTGAATTT TAAGGGAAAT GCGTTATGGA ATAACGTTAT TTTCATTACT
TTCCTGGCGC TGATGGTTCT TGCCATCTGG AAACATTACG CCCTCAAACC CAAACACCCC
CAAGTGCCGA TTCCCGTCCC GCAGGAGACA GCGGAACCGG TAGAACAGGA AAGTACGGTT
ATTTTAATTC TCGGTCCCTA TGCTGAGAAA TGGTTTAGTA ACCCAGAATC GCCAGACAGT
ACACGTTTTT CCAGCCATGC GGTCTGGATA TTAATCACGA ATCCCGCCGC GCTGCAAAAA
CGCCTCACAT ATATTGCTGA ACATCATCCA TCCGCTCAGG TATTGACCTT TTTCCCTTTC
TTGCCGGATG TCTATGAGAA TGCAGCAGTG ATGATGTCAA AACTCACGGT GTGGCAGAAC
ACGTTTTCAA CGTTATCACT GCGATCCCCC CTCCCCTGCG TATTTGCTAT TTATGCGCAG
TTGAGTAATG AACGCCTTAG CCATAATTCT GATAACGCAT ATTGGACTGG AAATATTAAT
CTTGCGAACC AGCAGCCTAT CGAAATTACG CAAGCCCTAC AGTCACTGAG CCAAAGACTT
GAGTTACAAG ATATCAATCA CTCAGGATTT GCAACTCAGC GTAATGTTAT GGCCCATAAT
TTATTTACCT GGTTGAATGA ATCGGGGGTG ACAAACCTTC TGCAATCTAT TTTCTCGCGC
ACCCCCTTAC GGCTAACAGA CGTCATTTTG TCGGATAATG GCAAAGGGTT CATCAGGCAT
GGTGCCTGGT CAGCCTGGCT GGAGAAAAAG TTTGGCATCA TACCGAGCTT AGCCTCAACC
TTGTCACTGC CACCTTTCCC TGCGGTGATC AATGACCAGA AGCCCGCAAT AAAACCACGG
GTGAAAACAC CGGTGATAAA ACCTATCCCC GCATCCCGTG GGTGGTTATG GAGTGTGTGC
TTCGCCGCGG TGCTATTAGC CTCACATATG CTAAACACCC TGTGGCAAGA AAAAAACCGG
CATGCGCAAT TTAACCAACA GATGGTGCCG TTGGACAATA TCAACGATTT TTCTGCTCAG
TACCTGGCAC GCAGCATCAC CCAGTTAACC GATGAAGGTA AAACATTAAC CACATGCGTT
AATACATTTG ATGTGACACG TTGGGGGCTG TCTCAATGTC AGACGTTATT AAGCCAAATC
AACCGCCGGA TTGAATCCTA TGAAAATATT CCTGTTTTCA GTTTTGCCCA AAAGCTCCCT
CTGTTTGACT CAAACAGTAC CAAGCTGAAA CTGAACTCAC AAACCAATGA AATGATGATG
GAGTTGTTAT CACTGGTCGA ACAGAATAAA GGGAAAAAAA TCTTAATTGT TGGCCATTCT
GATAACACGG GCAGTTCCTC CATGAACATG ACACTTTCCG AACAGCGTGC GCTGGCCCTT
CGCGATTGGT TAATTAAACG CAGTGATATC ACTGTCGATA ATTTTATTAC CAAGGGAATG
GGGGCTTCAG AACCGGTTGC GACCAATCAC ACGGAAGCGG GTCGAGAACA AAACAGACGC
GTCGAAGTAC TGATATTACC CACACAAGAT AGAACAAGAA TGACGGAGCC TAAACCTTTA
TGA
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| Protein sequence | MFKVKLNKTL SLLWLAAVGT LLVSVNFKGN ALWNNVIFIT FLALMVLAIW KHYALKPKHP
QVPIPVPQET AEPVEQESTV ILILGPYAEK WFSNPESPDS TRFSSHAVWI LITNPAALQK
RLTYIAEHHP SAQVLTFFPF LPDVYENAAV MMSKLTVWQN TFSTLSLRSP LPCVFAIYAQ
LSNERLSHNS DNAYWTGNIN LANQQPIEIT QALQSLSQRL ELQDINHSGF ATQRNVMAHN
LFTWLNESGV TNLLQSIFSR TPLRLTDVIL SDNGKGFIRH GAWSAWLEKK FGIIPSLAST
LSLPPFPAVI NDQKPAIKPR VKTPVIKPIP ASRGWLWSVC FAAVLLASHM LNTLWQEKNR
HAQFNQQMVP LDNINDFSAQ YLARSITQLT DEGKTLTTCV NTFDVTRWGL SQCQTLLSQI
NRRIESYENI PVFSFAQKLP LFDSNSTKLK LNSQTNEMMM ELLSLVEQNK GKKILIVGHS
DNTGSSSMNM TLSEQRALAL RDWLIKRSDI TVDNFITKGM GASEPVATNH TEAGREQNRR
VEVLILPTQD RTRMTEPKPL
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