Gene YPK_1460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1460 
Symbol 
ID6091097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1611426 
End bp1611950 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content41% 
IMG OID641596529 
Producthypothetical protein 
Protein accessionYP_001720206 
Protein GI170023701 
COG category[S] Function unknown 
COG ID[COG4331] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.31634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAGA TGAAAAATCG ATTTAGTAGC AAAAATCTTT TTGGTGAAAA AAACGTTCAT 
GCTGTTTTTG AACTGAGCCT GCTGTTGAAA GCCTCGTTGG CCATGATGGA GATTATCGCA
GGGGTCTTAA CCTACTTTGT GACACCACAG TTTTTACTGA ATACGCTGCA TCGCATCACA
CAAGTGAGTT TTATTGAAAG CCGTGGTGAC ATTATTGCCA ATTATCTGTT GCATGCGGCC
CAACACCTCT CCATTAGTAG CTTACATTTC GCTGCGTCAT ATTTGTTTAT CCACGGTGCC
ATTAAGTTAT GGATTATTAT TGGGTTGTGG CGCAAAAAAC TCGGTTATTA CCCTGTTGCT
GTGGCGGTTT TTAGTCTGTT TATTGTTTAT CAACTCTATC GTTATACTTT TACTCATTCT
CTGCTTTTGA TCCTGATAAC CATCCTGGAT GTGTTTGTTA TTGCCCTGAC ACTGCTTGAA
TACCGGCGGT TACGCCATGG GGAAAAAACC TGTTCTGAGA GCTAA
 
Protein sequence
MLKMKNRFSS KNLFGEKNVH AVFELSLLLK ASLAMMEIIA GVLTYFVTPQ FLLNTLHRIT 
QVSFIESRGD IIANYLLHAA QHLSISSLHF AASYLFIHGA IKLWIIIGLW RKKLGYYPVA
VAVFSLFIVY QLYRYTFTHS LLLILITILD VFVIALTLLE YRRLRHGEKT CSES