Gene YPK_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1454 
Symbol 
ID6088200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1604739 
End bp1605515 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content51% 
IMG OID641596523 
Productputative anaerobic dimethyl sulfoxide reductase, C subunit 
Protein accessionYP_001720200 
Protein GI170023695 
COG category[R] General function prediction only 
COG ID[COG3302] DMSO reductase anchor subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGAAT TACCTTTAGT ATTTTTTACC GTGCTCGGGC AGACCGCCGT CGGGCTGTTT 
ACACTGGCGT GGCTCAGTAA CAAGCTAGGG ATGACCACGC CGCTGCAACT GAAGCAGGCC
AATATTGTTG GGCTGATTCT GGTGATGGCC GGCCTGTTAA TTGGCACCCT GCATGTTGGG
CAACCTCTGC GGGCGATAAA TATGTTACTG GGTGTTGGCC GTTCGCCAAT GAGTAATGAA
ATTCTGCTCA GTGGCCTGTT TGTTGCCATG GCTTGCGGCA CGGTATTCTT TTCGACTCTG
GTGAAAAATT CGCTACTGGC GGCGCTGTGT AATTTTGCCA CTGTTCTGGT TGGTCTGACT
TTTGCTTGGT CAATAACTCA AGTCTATCAA CTGACCACGG TCCCTAATTG GGATACGTCA
TATACCTCAT TGCAACTTTG GATGACGGTA TTGGTTGGCG GTGGGGCTTT CGCTATGTTA
ACCGGGGCGC GTCAACTTGG TGCCATAGCA TTGCTAGCCG GTGCCATTGT GACCTTGGTG
AATAAACCGG GTTATTTAAC TTTCCTCGGG CAAGGCTCGG CGGAATTGAG TAGCCAGCAG
ACCCTCTTCT GGGGAATTCA GATCCTGCTG TTGGTATTAG GCGTTTTTGT GGCCGCTGCG
GCGTTACTGA AAGACAAAAT CCCACGGGCA ACACTGGCAG TGTGTGCATC AGCGCTTATC
ATCGGTGAAT TAGCCGGGCG GATTGCCTTT TATAATCTCT GGCAAATACC AATGTGA
 
Protein sequence
MHELPLVFFT VLGQTAVGLF TLAWLSNKLG MTTPLQLKQA NIVGLILVMA GLLIGTLHVG 
QPLRAINMLL GVGRSPMSNE ILLSGLFVAM ACGTVFFSTL VKNSLLAALC NFATVLVGLT
FAWSITQVYQ LTTVPNWDTS YTSLQLWMTV LVGGGAFAML TGARQLGAIA LLAGAIVTLV
NKPGYLTFLG QGSAELSSQQ TLFWGIQILL LVLGVFVAAA ALLKDKIPRA TLAVCASALI
IGELAGRIAF YNLWQIPM