Gene YPK_1443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1443 
Symbol 
ID6091142 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1594784 
End bp1595260 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content49% 
IMG OID641596512 
Producttransmembrane pair domain-containing protein 
Protein accessionYP_001720189 
Protein GI170023684 
COG category[S] Function unknown 
COG ID[COG4125] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGTCC ATCACAGATC TTTGGTTGAA CGGGTTATCC ATGCAATTGG CTTTGAGGTG 
ATTGCCGTCG CTATTTGTGC GCCGGTCGGG GCATGGCTAT TAGATCGTTC AATATTACAA
ATGGGGACAC TGGCGGTGCT TCTCTCGTCA ATCGCAATGT TGTGGAACAT TGTTTACAAC
AGCCTGTTTG ACTATTTTTG GCCCGTCAGT CGGGTGATAA GAACGCTCAA GATACGGGTA
TTCCACGCGC TGGGATTTGA AGGTGGCTTT ATTCTGATGG GCTTACCCGT TGCTGCCTTT
GCGTTAGGGA TCTCAATATG GCAGGCGTTA GTGCTCGAGA TCGGTTTCTT CCTGTTCTTC
CTGCCCTATA CGATGTTTTA TAACTGGCTG TATGACAGTT TGCGGATGCG GATTATTCGC
TCCCGCCAGG CAACTGAATT GAAACCCGCC TCAGAAAATC GGCGTGGTTC ACGCTAA
 
Protein sequence
MQVHHRSLVE RVIHAIGFEV IAVAICAPVG AWLLDRSILQ MGTLAVLLSS IAMLWNIVYN 
SLFDYFWPVS RVIRTLKIRV FHALGFEGGF ILMGLPVAAF ALGISIWQAL VLEIGFFLFF
LPYTMFYNWL YDSLRMRIIR SRQATELKPA SENRRGSR