Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1420 |
Symbol | |
ID | 6088028 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1566589 |
End bp | 1568049 |
Gene Length | 1461 bp |
Protein Length | 486 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641596484 |
Product | Na+/solute symporter |
Protein accession | YP_001720167 |
Protein GI | 170023662 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.193925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCGC CATTAATTAT AATATGTACA TTCTTCCTGT TTAGTATTTA TCTTGCCATT CGCTCTAAAA AAGGCAAGAA GATGGACCAT GAAGGGTGGA CCACCGGTGG CCGTAGCTAC GGCGCTTTAT TAGTATTTCT ACTGAGTGCT GGGGAGATAT ACACAACATT TACATTCTTG GGGGGCAGTG GCTGGGCTTA TGGAAAAGGC CCAGCCATAT TATATACGCT CACCGTTAAT GCCTTTATGG GGATATCACT TTATTGGCTT CATCCTATTA TTTGGAAGTA TGCTAAAGAT AATAATGTTA GGTCTATTTC AGACTTCTTC GCACTGAAAT ATAAAAGTTC ATCATTAGGT ATACTGATTA GCATATTCTC TATCGCTGCA ATGGTTCCGC TTTTCATTTT ACAATTAAAA GGACTTGGGA TCATTGTCTC ACAAGCATCT TATGGCTCTA TATCGTCCAA TATGGCAATA TGGATTGGCG TGATTTCAGT CTCTGTTTTT GTGATGATTT CTGGAATTCA TGGTTCTGCC TGGACATCTG TATTAAAAGA TTTCATGATA TTGTTTGTGG TTGTCTTTAT CGGTATTTAT ATTCCAATTC ACTACTACGG TAGTATTGGC AACATGTTTC AATCTATTGA AACAGTTAAT CCTGGGTATC TTGTCTTCCC GAAAGAAGGA CTCAACATAC CTTGGTATAT CTCTACCGTA TTCTTATCCG TAGCCGCTTA TTTCTGTTGG CCACACTATA TGACGGCTGT ATTTACAGCC AAAAATGAAA CCTCATTAAA GCGTAATAGC ATACTGATTC CGGCTTACAG TCTGGTCATG CTGTTTGCCT TTTTTGTCGG TTTTGCGGCA ATCTTAAATG TCCCTGACTT AACCGGGCCA GATGTTGACC TGGCTTTATT TGAAATATCA AAATCAACCT TCTCAAGTTA TATTGTTGGG TTTATTGGTG CGGCAGGTAT GCTGACAGCA CTGGTACCGG GTTCTATGTT ATTACTGGCG ACGGCAAATA TGCTGGCCGG TGTCGTCCAA AAGATTTTCC GCCTGGATGT GGAGAAAAAT AAATCGGGAA ATCTTTCTCG CTATATGGTG CCTGTTGTTG CCTTGGTCTC TTTGTATTTT ATCTTTAATG GCAATGATAC GCTGGTCGCT ATAATGCTAC TTGGTGTCAA TATAATTGCT CAGTTCTTCC CAGCGCTTAT ATTCAGTTTT TGCAAAAAGA ATCCAATCAC GACTGCGGGC GCTTTTTCGG GGATTATGGT CGGTGTCATT ATTTTGGCGG TCACCTATGT CTATCATATT TCAATAGAAG ATATTTTCCC GTTCATTACT AATGGCTTTG AGTATATGAA TATTGGGGTT GTCGCCTTTG CTATGAACTT TATCGTTACT TTCTTCATCT CATATTTAAC AAGAAGCTAT TATAAAGAAG TCACTGTTTA A
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Protein sequence | MNAPLIIICT FFLFSIYLAI RSKKGKKMDH EGWTTGGRSY GALLVFLLSA GEIYTTFTFL GGSGWAYGKG PAILYTLTVN AFMGISLYWL HPIIWKYAKD NNVRSISDFF ALKYKSSSLG ILISIFSIAA MVPLFILQLK GLGIIVSQAS YGSISSNMAI WIGVISVSVF VMISGIHGSA WTSVLKDFMI LFVVVFIGIY IPIHYYGSIG NMFQSIETVN PGYLVFPKEG LNIPWYISTV FLSVAAYFCW PHYMTAVFTA KNETSLKRNS ILIPAYSLVM LFAFFVGFAA ILNVPDLTGP DVDLALFEIS KSTFSSYIVG FIGAAGMLTA LVPGSMLLLA TANMLAGVVQ KIFRLDVEKN KSGNLSRYMV PVVALVSLYF IFNGNDTLVA IMLLGVNIIA QFFPALIFSF CKKNPITTAG AFSGIMVGVI ILAVTYVYHI SIEDIFPFIT NGFEYMNIGV VAFAMNFIVT FFISYLTRSY YKEVTV
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