Gene YPK_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1416 
Symbol 
ID6089086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1561697 
End bp1563115 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content47% 
IMG OID641596480 
Productvon Willebrand factor type A 
Protein accessionYP_001720163 
Protein GI170023658 
COG category[R] General function prediction only 
COG ID[COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTACTAA AACCAGCCAT TTTAATAAAA ACTGACATGC TAATAAAACC AGACATCCTG 
ATAAAACCGG CCACGCTAAT AAAACAGGCC GCTCGAATAA AGCAGATGAC CCTATTGTTG
CTATTATTCC TTTTTTCGCT GTTTGGGGTA GCCAAGGCGG CGACACAAGT GGTCAATGTC
AAATCAGAAC TTGCTGCGCC CGTTATGCTG GCTAATAGCG AAGATAAAAA TTACCTGAAA
ATTTCTCTTA CCGGTTTTAA TCTCGACAGC ACCCGTCGTA GCCCAATCAA TCTGGCGCTG
GTCATTGATC GTTCTACGTC AATGAGCGGT GAGCGCATCG AGAAAGCCAG AGAAGCGGCG
ATTTTAGCGG TTAATATGCT TAACATCACC GATACGCTAT CGGTGGTGGC CTACGATAAT
CACGCCGAGG TGATCATTCC GGCCACGAAA GTCACTGATA AGCCAGCGCT GATTGCCAGC
ATTCAACAGC ACATTCACCC AAGGGGAATG ACCGCCTTGT TTGCTGGTGT CAGTATGGGT
ATTGGTCAAG TGGATAAACA CCTGAACCGT GAGCAGGTCA ATCGCATCAT CCTTATCTCT
GATGGTCAGG CGAATACTGG CCCCACCTCA ATCAGCGAAC TTTCCGATCT GGCCCGCATG
GCGGCTAAAA AAGGGATTGC CATCACCACT ATCGGGCTGG GCCAGGATTA TAACGAGGAT
CTGATGACTG CCATTGCGGG TTATAGCGAC GGTAACCACA CCTTTGTCGC TAACTCGGCA
GATCTGGAAA AGGCGTTCAC CAAAGAATTC CAAGATGTGA TGTCCGTCGT CGCACAGGAT
ATCGTTGTTC AGATTAAGAC TGGCGATAAG GTGAAACCGG TACGACTACT GGGGCGCGAT
GGCGATATCC TCGGCAATAC AGTGAATGTG AAACTGAATC AGCTTTACTC TAATCAGGAA
AAATACATTC TACTGGAGGT GATTCCGGAA AAAGGCACTG ACAAGCAGCA AAAAGATCTG
GCCGATGTCA GTATCAGCTA CCTGAATCTC AGCAGTAAAA AACAAGATCA GATTAATGAA
CGAGTGACCG TCAGCTACAG CCAATCCGTA GAAAAGGTCA ACGATGCTGT ACAAGAAGAA
GTATTAGCGG AATCAGAGAT TCAAAAAACA GCGCTGGCCA ATGATGAAGC CATTAAATTG
ATCGACGCGG GGCGCAAGGA TGAAGCGAAG AAAGTGCTAG AGTCCAATGC CTCAAAACTG
GACAGCATGT CGTTCTCCAG CCCGGTTGCA GAGAAAAAAG TGCGAGAGAG TACGAATAAA
CAGCGTAAAT TAGCGGATGA CATTGACAGT AAAGATGCCG CCACTTACCG TAAAGAGCTG
AAAGAACAGA ACTACAACGT CAAACAGCAG CAGAAGTAA
 
Protein sequence
MLLKPAILIK TDMLIKPDIL IKPATLIKQA ARIKQMTLLL LLFLFSLFGV AKAATQVVNV 
KSELAAPVML ANSEDKNYLK ISLTGFNLDS TRRSPINLAL VIDRSTSMSG ERIEKAREAA
ILAVNMLNIT DTLSVVAYDN HAEVIIPATK VTDKPALIAS IQQHIHPRGM TALFAGVSMG
IGQVDKHLNR EQVNRIILIS DGQANTGPTS ISELSDLARM AAKKGIAITT IGLGQDYNED
LMTAIAGYSD GNHTFVANSA DLEKAFTKEF QDVMSVVAQD IVVQIKTGDK VKPVRLLGRD
GDILGNTVNV KLNQLYSNQE KYILLEVIPE KGTDKQQKDL ADVSISYLNL SSKKQDQINE
RVTVSYSQSV EKVNDAVQEE VLAESEIQKT ALANDEAIKL IDAGRKDEAK KVLESNASKL
DSMSFSSPVA EKKVRESTNK QRKLADDIDS KDAATYRKEL KEQNYNVKQQ QK