Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1415 |
Symbol | |
ID | 6090842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1559920 |
End bp | 1561464 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641596479 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001720162 |
Protein GI | 170023657 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCCGT CAAAAAGCCT GTTTCTTTTT ACCTCTATCA CGTTCTTAAT CTGCGCGGCT ATCGCCTACT TCGGCTATCG CAGCCTCACC CATGAAACAC TGCTGCGCCA TTATCAGAAC CAACGTCTGG CACAGAGTCA TACCACACAG GTCAGTACAT TTATTCTGGA TCTGCTAAAC CAGAATGCCG TGCGTCTGGG TTCGCTTGTT TCTTATATTC AGTTAGATAA TGCGTCGCTA AACGCCCTGA TCGCGCAAGA GAGTAGTATT GACGCCCTAT TTGTATTGAA GAAAAACCAA CTCTTGTACC CCAATACTCA AGCAGCCTTG ACCGAGAAAG AGAAAGCCTG GATACAAGCG ATCACCCCTA TCATTCAGGA CCCGAGCCTG CTCTACAGCC ACCACTATAC CGATGAACAG ACCCGGCCAA CCTCAGGCTG GTACCTCAGT CGCGAACTCA GCGACCCACT GTTGATATAT TGGCAGGCGC GGGATAATCA ACTGATCGGT TTTAAAGTCC CCTACGTCAA GCTGCTGTCT GATGTGATTA ACACCATGAC ATTTGACTCT GCACCGAACA CACTGCAAGT CCTGGATGAT GGGCGCTTGC TCTACCAAAG CGGCAGTGAA GAGCTGTTAA CCCAACAGGT GCCCTTGAAT TCCCAACGCC TGCCTTATCC GCTAGGTGCC TGGCAGATAG ATTATTACGC CAAGGCGGTA AACGGCGCGC CCCTTTATCT CTGGGGTGGG CTGCTGTTAT TACTGCTGAT GGTGACAGTT GGGCTGGTCA TGCTATATCT GTATCGAGAA TACAACCGCC AGTTACGGCT TGCTCAACAG CAGGTGAGCT TCGTCGGCCA GGTATCCCAC GAACTGAAGA CGCCACTAAC CAATATCACC TTATATGCAG AGATGTTGCA GGAGTTGCAA CCAGAGCAGA GCGTTCCTCC CACCGCAGAG CAGCGCTATC TGGAGGTGAT CCTCAATGAA AGCCAGCGGC TCTCGCGCCT GATTCAGAAC ATCCTCAGTT TTACCAAAGC GCCGAAACTC CATCTACAAA CGGTGGCGCT GCGCCCATTG CTGAACAAAA TTTATCACAC TTTTATTCCC GCGTTTTCCG CCAAAAATAT GGAGTTGGTG CTGATCATTA ATACCGATAT TCACCTCACG ACCGATGTCG ATCGCTTGAC GCAGATTATC AGTAATTTTC TCAGTAATGC CGAAAAATAC GCCTCACAAG GAAAACGGGT GGAGTTGATT GGTGAACAGG CTGATGACCG GGTGTTGATC CACGTAAGGG ACTATGGTAA CGGCATCGCC GCAAAAGAGT TAAAGGCGAT CTTCCAGCCC TTTTATCGAG TGAAGAGCCA TATCACTGAA GGTGTTTCCG GTACCGGTAT TGGTTTAACC ATCGCCAGCC AATTAGCCGC CAGTTTGCAG GGCGAAATTT CCGTCACCAG TAATCCGGCG GGTAGCTGTT TTACCCTAAA ACTGCCTATG ACGATTAAGC AAGATGCGGC CACAGACAAG GAGCAGTTCA CATGA
|
Protein sequence | MKPSKSLFLF TSITFLICAA IAYFGYRSLT HETLLRHYQN QRLAQSHTTQ VSTFILDLLN QNAVRLGSLV SYIQLDNASL NALIAQESSI DALFVLKKNQ LLYPNTQAAL TEKEKAWIQA ITPIIQDPSL LYSHHYTDEQ TRPTSGWYLS RELSDPLLIY WQARDNQLIG FKVPYVKLLS DVINTMTFDS APNTLQVLDD GRLLYQSGSE ELLTQQVPLN SQRLPYPLGA WQIDYYAKAV NGAPLYLWGG LLLLLLMVTV GLVMLYLYRE YNRQLRLAQQ QVSFVGQVSH ELKTPLTNIT LYAEMLQELQ PEQSVPPTAE QRYLEVILNE SQRLSRLIQN ILSFTKAPKL HLQTVALRPL LNKIYHTFIP AFSAKNMELV LIINTDIHLT TDVDRLTQII SNFLSNAEKY ASQGKRVELI GEQADDRVLI HVRDYGNGIA AKELKAIFQP FYRVKSHITE GVSGTGIGLT IASQLAASLQ GEISVTSNPA GSCFTLKLPM TIKQDAATDK EQFT
|
| |