Gene YPK_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1413 
Symbol 
ID6090193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1557603 
End bp1558835 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content33% 
IMG OID641596477 
Producthypothetical protein 
Protein accessionYP_001720160 
Protein GI170023655 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.173619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATAG TTAATTTTAT TAGTGCTCAG AATAGAGTTG AGATTGAATT TCTCTCAACA 
GAGAATGAAA AAAATAAAGA GGCATTGAAT TCAGTAAATA AATGGGAGAA TGATGCTCCA
TTTGGGGAAA ACAGAACCAA TGCTGCTAAT GAAATTCGTG ATGTTATAGA GAGAAATGCG
CCTATACTTA GGCTATCGCG TCTGAATATC AGTTCTTTAC CTGATGTTTT ACCGCCTAGT
CTCATCGAGA TTGAAATTTA TTATTGCGAT GAATTATCTA CTCTCCCTGA CAGTTTTCCT
TCCGAGCTTA CTAAGCTAAA AATTAGCCAT TGCCCTGAAA TTTCATCTTT ATATAAGAAT
GCACCAAAGC GTTTGACTAA ATTAGAAATA ATATCTTGTC CGAAAATTTC AAATGCTATA
ATTCCACTAC CTGAATCATT ACAATATATT AAATTAGATA TAGACTCGAA AGAGCGCCTT
TCTCTCTCGT TTGATAAATT TCCTAAAAAT TTAAGAGGTA TTAATTTAAG TGATAGTTTT
TTAATTGAAA AAAGCAAATT CAAGGATAGA AAGATCCGAT TGAATGGTCT AGTGCCATCC
GTAGCTCTAG AGTTTAAATT AGGAGACATT CTATATGGAA TTGCTCAGTG TCAACATGAG
GTGATGCAGC AACTAATTAA TTTTAATAAC TTTTCTAACA AAGATATTTG TTCGCAAACA
ACAATTACTG ATGCTGTTTG GGAACATCGT AATTATTTTT CCCGTGATAA ATATAGAGAC
GATGCGACAA TCAAAGAAAT GTTAAATGAT GCTGATCGCG GAATTAAATT CAAAGATTTC
CTAGAAAAAC ATGAAAAGTA TAATATTTTA AGTCGTTCGG GAATAAAATC ATACCGTCCT
CATAAAAATG AGGAGGATAT ATGTTTATCA AGGACCAGTA AGGCTGGTCT TGAATTTCAG
ATCATGGAAA GGCAAGAGCG TGTATTTTTT TGTATAGATA ATTTGAATAA TTGTATTCCT
GAAATTGCAC AAAAAAAACC TGATTATGGT ACCTATATCA CAGCCTCTGA GTTGAGATGG
CTTTACCGTC GTAAAGATCA CCCTAATGTA AAAAATAATG TTCAATTCTG CTTGGAGGGA
GCATTTATTT CACAAGAAGA GGTATTTTCA CTGCCTGGTT GGGAAACTTA TTTTCCTAAA
AGAAAAAGTA ACTTCATACC TTCCTATGTT TGA
 
Protein sequence
MGIVNFISAQ NRVEIEFLST ENEKNKEALN SVNKWENDAP FGENRTNAAN EIRDVIERNA 
PILRLSRLNI SSLPDVLPPS LIEIEIYYCD ELSTLPDSFP SELTKLKISH CPEISSLYKN
APKRLTKLEI ISCPKISNAI IPLPESLQYI KLDIDSKERL SLSFDKFPKN LRGINLSDSF
LIEKSKFKDR KIRLNGLVPS VALEFKLGDI LYGIAQCQHE VMQQLINFNN FSNKDICSQT
TITDAVWEHR NYFSRDKYRD DATIKEMLND ADRGIKFKDF LEKHEKYNIL SRSGIKSYRP
HKNEEDICLS RTSKAGLEFQ IMERQERVFF CIDNLNNCIP EIAQKKPDYG TYITASELRW
LYRRKDHPNV KNNVQFCLEG AFISQEEVFS LPGWETYFPK RKSNFIPSYV