| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1407 |
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| Symbol | |
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| ID | 6088640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1550617 |
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| End bp | 1552149 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641596471 |
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| Product | putative sialic acid transporter |
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| Protein accession | YP_001720154 |
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| Protein GI | 170023649 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00891] putative sialic acid transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATTT CAGTAGGTCC ATCTCGTGAA GATAAACCAT TATCGGGTGG CGCTAAACCA
CCCCGTTGGT ACAAACAACT TACCCCGGCG CAATGGAAGG CCTTTGTTGC CGCTTGGATC
GGTTATGCCC TGGATGGCTT TGACTTTGTT CTGATTACTC TGGTTCTGAC CGATATTAAA
CAAGAATTTG GCCTGACACT GATTCAGGCG ACCAGCCTGA TTTCTGCTGC CTTCATCTCA
CGCTGGTTTG GTGGGTTGGT ACTGGGTGCG ATGGGGGATC GCTATGGCCG TAAACTGGCC
ATGATCATCA GTATTGTGTT GTTCTCCTTC GGTACGTTGG CCTGTGGCTT AGCACCTGGC
TACACCACGC TGTTTATTGC TCGCTTGATT ATCGGTATTG GCATGGCGGG TGAGTATGGT
TCCAGCTCGA CCTATGTGAT GGAAAGCTGG CCTAAAAACA TGCGTAATAA AGCCAGTGGC
TTCCTGATTT CTGGCTTCTC TATCGGTGCG GTACTCGCGG CGCAAGCCTA CAGCTACGTG
GTGCCCGCAT TTGGTTGGCG TATGTTGTTC TACATTGGAT TATTGCCAAT TATCTTTGCA
CTGTGGTTGC GTAAAAACCT ACCGGAAGCA GAGGACTGGG AAAAGGCACA AAGTAAGCAG
AAAAAAGGTA AACAGGTCAC TGACCGGAAT ATGGTGGATA TTCTGTATCG CAGTCACCTC
AGTTATCTGA ATATTGGCCT GACGATATTT GCCGCTGTCT CACTTTACCT CTGTTTTACT
GGCATGGTCT CGACGTTGCT GGTAGTGGTT CTCGGTATTC TTTGCGCTGC AATATTTATC
TATTTTATGG TTCAAACCAG TGGCGATCGC TGGCCTACGG GCGTCATGCT GATGGTCGTG
GTGTTCTGTG CGTTCCTCTA CTCTTGGCCG ATCCAGGCGT TGTTACCGAC CTACCTGAAA
ATGGATCTCG GCTATGACCC ACACACCGTA GGCAATATAT TGTTCTTCAG TGGTTTTGGT
GCGGCCGTGG GTTGTTGTGT TGGCGGTTTC CTTGGCGATT GGTTGGGTAC CCGCAAAGCC
TATGTGACCA GTTTGCTGAT ATCACAGCTC TTGATCATCC CGCTGTTTGC CATCCAAGGC
AGCAGTATTT TGTTCTTAGG GGGATTACTG TTCTTACAAC AGATGCTGGG GCAGGGGATT
GCGGGCCTGT TGCCGAAACT GCTGGGCGGT TATTTTGATA CCGAACAGCG AGCCGCAGGA
CTGGGCTTTA CCTACAACGT CGGCGCATTG GGAGGGGCAT TGGCCCCCAT ACTGGGGGCA
TCGATTGCTC AACATCTCAG TTTAGGCACC GCGTTGGGAT CGCTCTCTTT CAGTCTGACA
TTCGTGGTGA TCCTACTGAT TGGTTTTGAT ATGCCATCCC GTGTACAGCG TTGGGTCCGC
CCATCAGGTT TACGGATGGT GGATGCCATC GATGGCAAAC CATTCAGTGG TGCCATTACG
GCCCAGCATG CGCGAGTAGT GACACAGAAA TAA
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| Protein sequence | MSISVGPSRE DKPLSGGAKP PRWYKQLTPA QWKAFVAAWI GYALDGFDFV LITLVLTDIK
QEFGLTLIQA TSLISAAFIS RWFGGLVLGA MGDRYGRKLA MIISIVLFSF GTLACGLAPG
YTTLFIARLI IGIGMAGEYG SSSTYVMESW PKNMRNKASG FLISGFSIGA VLAAQAYSYV
VPAFGWRMLF YIGLLPIIFA LWLRKNLPEA EDWEKAQSKQ KKGKQVTDRN MVDILYRSHL
SYLNIGLTIF AAVSLYLCFT GMVSTLLVVV LGILCAAIFI YFMVQTSGDR WPTGVMLMVV
VFCAFLYSWP IQALLPTYLK MDLGYDPHTV GNILFFSGFG AAVGCCVGGF LGDWLGTRKA
YVTSLLISQL LIIPLFAIQG SSILFLGGLL FLQQMLGQGI AGLLPKLLGG YFDTEQRAAG
LGFTYNVGAL GGALAPILGA SIAQHLSLGT ALGSLSFSLT FVVILLIGFD MPSRVQRWVR
PSGLRMVDAI DGKPFSGAIT AQHARVVTQK
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