Gene YPK_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1399 
Symbol 
ID6087622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1543302 
End bp1544201 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content49% 
IMG OID641596463 
ProductDyp-type peroxidase family protein 
Protein accessionYP_001720146 
Protein GI170023641 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2837] Predicted iron-dependent peroxidase 
TIGRFAM ID[TIGR01413] Dyp-type peroxidase family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.55791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTCAAG TTCAGAGTGG CATTCTGTTG GAGCACTGTC GTTTTGCCAT TTTTATGGAA 
GCAAAAGTAC AGGGGGAGTT AGATGCTATT CGCCTAGGAT GCAAAAAATT CTGTCAATCA
TTGCAAGAGT TACAGCAACA ATTTCCAGAT GAGCATTTAG GTGCAGTGAT CGCCTTTGGC
TCCAATGTCT GGCACGACTT ATCCAATGGA CAGGGCGCAA AAGAGCTAAA ACCTTTTGTT
CCATTGGGTA AAGGCTTGGC TCCCGCCACT CAGCGTGACC TGCTGATTCA TATTCAGTCA
CTGCGTCAGG ATATTAACTT TACGTTGGCA CAAGCTGCGG TAGCGGCTTT TGGTAGCGCG
ATTGCGGTTG AAGAAGAGAC ACATGGTTTC CGTTGGGTTG AGGAGCGTGA TTTTACCGGC
TTTATCGACG GTACCGAGAA CCCACAAGGC GATAAGCGCC CGGAAGTGGC CGTGATTGCC
GATGGCGAAG AGGATGCGGG TGGCAGTTAT GTGCTGGTTC AGCGCTATGA GCATAACCTG
AACAAATGGC AGCGCATTCC TGAAAATGAG CAAGAGAAAA TTATTGGCCG CACCAAACTC
GACAGCCAGG AGTTGCCATC AGATCAGCGC CCGGAGACCT CTCATGTCAG CCGTGTTGAT
CTGAAAGAAA ATGGCAAGGG CCTGAAAATT CTGCGCCAAA GCCTGCCTTA TGGTCTCGCC
AGTGGTAAAC ATGGGCTGTA TTTTATCGCC TATTGCGCGC GCTTACATAA TATCGAACAG
CAATTGTTGA GCATGTTTGG TGATATAGAT GGTAAGCACG ATCAGTTGCT GCGTTTTAGC
AAACCGGTTA CCGGCAGCTA TTATTTTGCC CCCTCACTGA CGGCCTTATT GTCGCTGTAA
 
Protein sequence
MTQVQSGILL EHCRFAIFME AKVQGELDAI RLGCKKFCQS LQELQQQFPD EHLGAVIAFG 
SNVWHDLSNG QGAKELKPFV PLGKGLAPAT QRDLLIHIQS LRQDINFTLA QAAVAAFGSA
IAVEEETHGF RWVEERDFTG FIDGTENPQG DKRPEVAVIA DGEEDAGGSY VLVQRYEHNL
NKWQRIPENE QEKIIGRTKL DSQELPSDQR PETSHVSRVD LKENGKGLKI LRQSLPYGLA
SGKHGLYFIA YCARLHNIEQ QLLSMFGDID GKHDQLLRFS KPVTGSYYFA PSLTALLSL