Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1393 |
Symbol | |
ID | 6088063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1536337 |
End bp | 1537266 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641596457 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001720140 |
Protein GI | 170023635 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.586678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACTCAC CCGATATAGC CCTAATCAAA ACCTATCTGC TCACTTTGCA GGATAACATC TGTGCGGCCC TGGCTCAGGC CGATGGCCAC GCCGAATTCA CGGAAGAGTG CTGGGTCCGC GAAGAAGGTG GCGGTGGCCG CAGCCGGGTC TTGGTTAATG GCGCTGTATT CGAACAAGCT GGGGTTAACT TCTCCCATGT GTCCGGGGCG ATGTTACCCG CCTCTGCCAC TGCTCACCGG CCAGAGTTGG CGGGCCGCAG TTTTCAGGCG CTGGGCGTGT CGCTGGTTAT TCATCCGCTA AATCCTTATC TGCCTACCAG CCACGCCAAT GTGCGGTTCT TTATTGCTGA GAAACCCGGT GAAGACGCCG TGTGGTGGTT TGGCGGTGGT TTTGATTTAA CCCCGTACTA CGGCTTTGAA GAAGATGCCA TTCATTGGCA TCAGGTAGCG CATAGCCTTT GCCAGCCATT CGGCGAGCAA ATCTATCCGC GCTATAAAAA ATGGTGTGAT GACTATTTTT ATATTAAACA TCGCCAGGAA GCCCGTGGTA TTGGCGGCCT GTTTTTTGAC GATCTGAATA GTCCTGATTT TATGACCTGC TTTAATTTCA CCCAAGCCGT TGGCGATGGC TTCCTGGCGG CTTATATGCC AATCGTCGCG CGGCGTAAAG CCCTGGGCTG GGGTGATCGA GAGCGTCAAT TCCAGCTTTA TCGCCGGGGC CGCTATGTCG AGTTCAATCT GGTCTGGGAT CGCGGTACGT TGTTCGGCCT GCAAACGGGT GGGCGCACTG AATCTATTTT GATGTCCCTG CCGCCGTTGG TGCGCTGGGA ATATAACTAT CAGCCAGAGG CAGATAGTGC AGAAGCCGCG TTGTACCGCG ATTTTCTGCC GGTAAAAGAC TGGTTAGCGA TTAAAGGAGA AACACACTAA
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Protein sequence | MNSPDIALIK TYLLTLQDNI CAALAQADGH AEFTEECWVR EEGGGGRSRV LVNGAVFEQA GVNFSHVSGA MLPASATAHR PELAGRSFQA LGVSLVIHPL NPYLPTSHAN VRFFIAEKPG EDAVWWFGGG FDLTPYYGFE EDAIHWHQVA HSLCQPFGEQ IYPRYKKWCD DYFYIKHRQE ARGIGGLFFD DLNSPDFMTC FNFTQAVGDG FLAAYMPIVA RRKALGWGDR ERQFQLYRRG RYVEFNLVWD RGTLFGLQTG GRTESILMSL PPLVRWEYNY QPEADSAEAA LYRDFLPVKD WLAIKGETH
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