Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1362 |
Symbol | |
ID | 6091285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1502814 |
End bp | 1503713 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641596426 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_001720109 |
Protein GI | 170023604 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.147738 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTACGG GAAGCCCAAT GTTTACAGGC AGCATAGTTG CGCTAATAAC GCCAATGGAC GACAACGGTG ATGTCGATCG TGCAAGCCTG AAGAGCCTGA TTGATTACCA CGTGGCCAGT GGGACTGCGG CGATCGTCTC TGTGGGGACG ACGGGTGAGT CAGCAACGTT GAATCATGAT GAGCATGTCG ATGTGGTCAT GCAGACACTC GAACTGGCTG ATGGCCGGAT CCCGGTGATT GCCGGAACGG GGGCCAATTC CACCTCCGAA GCCATTTCTC TCACTCAACG GTTTAATGAT ACCGGTGTTG TGGGCTGCTT AACCGTGACG CCATATTATA ACCGGCCAAT GCAGGAAGGG TTATACCAAC ATTTTAAAGC GATCGCTGAA AGTACCGATT TGCCACAAAT TCTTTATAAT GTGCCTTCGC GTACGGGTTG CGATATGTTA CCGCCAACCA TTGCTCGCTT AGCGAAGATT AAAAATATTG TTGCGGTTAA AGAAGCCACA GGGAACTTAA GTCGGGTTAG TCAGATCCAA GTGCTGGTTG ATGATGAAGA TTTCATCCTG CTCAGTGGTG ATGATGCGAG TGGACTGGAC TTTATGCAAC TGGGTGGTAA AGGTGTTATT TCTGTGACGG CAAATATCGC TGCCCGTGAA ATGGTTGAAC TGTGCGCATT AGCAGCACAG GGAAATTTCG CCGAAGGTCG CCGTTTGAAT CAGCGCTTGA TGCCGTTGCA TCAGCATTTA TTTGTAGAAG CAAACCCAAT TCCGGTTAAA TGGGCCGCGA AGAGGTTGGG ATTAATGGCA AATGATACTA TGCGCCTGCC AATGACCCCA CTGACTGATC CGGCCAAACG GATTGTGGAA GACGCGTTGA AAAGCGCAGG TTTGCTGTAA
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Protein sequence | MFTGSPMFTG SIVALITPMD DNGDVDRASL KSLIDYHVAS GTAAIVSVGT TGESATLNHD EHVDVVMQTL ELADGRIPVI AGTGANSTSE AISLTQRFND TGVVGCLTVT PYYNRPMQEG LYQHFKAIAE STDLPQILYN VPSRTGCDML PPTIARLAKI KNIVAVKEAT GNLSRVSQIQ VLVDDEDFIL LSGDDASGLD FMQLGGKGVI SVTANIAARE MVELCALAAQ GNFAEGRRLN QRLMPLHQHL FVEANPIPVK WAAKRLGLMA NDTMRLPMTP LTDPAKRIVE DALKSAGLL
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