Gene YPK_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1357 
Symbol 
ID6090939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1498593 
End bp1499657 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content48% 
IMG OID641596421 
Producthypothetical protein 
Protein accessionYP_001720104 
Protein GI170023599 
COG category[R] General function prediction only 
COG ID[COG0628] Predicted permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAGAGC TGTTGTTACA ATGGTATCGC CGTCGTTTTA CTGACCCGCA GGTCATTACG 
TTACTGGTTA TCTTACTGGC GGGTTTCTGC ATTCTCTACT TCTTCAGCGG TATTTTAGCG
CCTTTGCTGG CCGCTCTTGT TTTGGCTTAT TTATTAGAGT GGCCAACTGC CCGCTTGCAG
CGTATTGGTT GTTCACGATC CTGGGCGGCC AGTATCGTAT TTGTGCTATT TGTCAGTATC
ATGCTGTTAG CGGTATTTGT CGTGGCACCA ACGGCTTGGC AGCAAGGGAT TAATCTGGCG
TCAGATATGC CAAAGATGAT CAATAAATTC AATGATTTTG CCCATACATT ACCGGCCCGT
TACCCGGCAC TGGTCGATGC CGGTATTGTC GATATGATGG CGGAAAATCT ACGCAGTAAA
ATGTCAGGTC TCGGCGACTC CGTGGTTAAA TTTTCTCTGG CCTCTTTGAT TGGCTTGCTG
ACATTGGCTA TTTATCTGAT TTTGGTTCCA TTGATGCTGT TCTTCTTACT CAAAGATAAA
GAACAGATGC TTAATGCGGT GCGCCGTGTT TTGCCGCGTA ACCGCGGTTT GGCCGGGCAG
GTATGGGTGG AGATGAACCA ACAGATTACT AACTATATTC GTGGCAAAGT GCTGGAAATG
GTGATTGTGG GTATTGCCAC TTATCTGGTG TTTTTCATCA TGGGGATGAA TTACGCTCTG
CTATTGGCGG TGCTGGTGGG GTTCTCTGTG TTGATTCCTT ATATTGGTGC CGTGATTGTC
ACCATCCCTG TGGTGTTGGT TGCGTTGTTC CAATGGGGTA TCGGGGCAGA TTTCTGGACG
CTTTTTGTCG CCTATTTAGT GGTGCAAGGG TTAGATGGCA ACTTGTTGGT CCCCGTGCTG
TTCTCTGAAG CTGTTAATCT GCATCCGTTG GTTATTATCC TATCAGTGAT CATTTTTGGC
GGTATGTGGG GTTTCTGGGG CGTATTTTTT GCCATTCCGC TGGCAACGCT GGTCAAAGCG
GTTATCCATG CCTGGCCAGA AGAATTCATT CCTGACGCGG ATTAA
 
Protein sequence
MLELLLQWYR RRFTDPQVIT LLVILLAGFC ILYFFSGILA PLLAALVLAY LLEWPTARLQ 
RIGCSRSWAA SIVFVLFVSI MLLAVFVVAP TAWQQGINLA SDMPKMINKF NDFAHTLPAR
YPALVDAGIV DMMAENLRSK MSGLGDSVVK FSLASLIGLL TLAIYLILVP LMLFFLLKDK
EQMLNAVRRV LPRNRGLAGQ VWVEMNQQIT NYIRGKVLEM VIVGIATYLV FFIMGMNYAL
LLAVLVGFSV LIPYIGAVIV TIPVVLVALF QWGIGADFWT LFVAYLVVQG LDGNLLVPVL
FSEAVNLHPL VIILSVIIFG GMWGFWGVFF AIPLATLVKA VIHAWPEEFI PDAD