Gene YPK_1352 details

Gene Information

• Locus tag: YPK_1352
• Symbol: upp
• ID: 6091027
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1493097
• End bp: 1493723
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641596416
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_001720099
• Protein GI: 170023594
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0234913
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATCG TTGAGGTGAA GCACCCGCTA GTAAAACATA AACTTGGTTT GATGCGTGAG 
AATGATATCA GCACGAAACG TTTTCGCGAA TTGGCTTCCG AGGTGGGGAG TTTGCTGACT 
TACGTAGCAA CCGCTGATCT GGAAACTGAA ACAGTGACCA TCGAAGGTTG GAATGGGCCG 
GTTGAAATAG AACAGATTAA AGGTAAGAAA ATTACAGTGG TGCCAATCCT GCGTGCGGGT 
CTGGGGATGA TGGAAGGGGT GTTGGAAAAT GTGCCCAGTG CGCGTATCAG TGTGGTAGGT 
GTGTATCGCG ATGAAGAGAC GCTGAAACCG GTACCGTATT TCCAGAAGTT GGTTTCCAAT 
ATCAACGAAC GCATGGCGTT AGTGGTTGAC CCAATGTTGG CAACCGGTGG TTCTATGATT 
GCTACTATCG ATTTGCTCAA GAAAGCAGGT TGCCAGAGCA TTAAGGTATT GGTGTTAGTT 
GCTGCACCAG AAGGTATCAA GGCGCTGGAA GAAGCGCATC CGGATGTTGA ATTGTACACC 
GCCTCCATCG ATCAGGGCCT GAACGAACAC GGTTATATTA TCCCTGGGTT GGGTGATGCC 
GGGGATAAGA TTTTCGGAAC TAAATAA 

 

Protein sequence

MKIVEVKHPL VKHKLGLMRE NDISTKRFRE LASEVGSLLT YVATADLETE TVTIEGWNGP 
VEIEQIKGKK ITVVPILRAG LGMMEGVLEN VPSARISVVG VYRDEETLKP VPYFQKLVSN 
INERMALVVD PMLATGGSMI ATIDLLKKAG CQSIKVLVLV AAPEGIKALE EAHPDVELYT 
ASIDQGLNEH GYIIPGLGDA GDKIFGTK