| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1333 |
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| Symbol | |
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| ID | 6090856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1468491 |
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| End bp | 1469576 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641596397 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001720080 |
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| Protein GI | 170023575 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.938281 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAACCT ATGTCAGCTT CAAAAATATC AAGAAGAGCT ACGATGGCGA CAAGCTGGTC
GTTAAAAACC TGAATCTGGA CATTCATGAG GGGGATTTTT TAACCCTGCT CGGCCCTTCT
GGTTCAGGTA AAACCACCAG CCTAATGATG CTAGCCGGGT TTGAAACCCC CACTCAAGGC
GAGATTACGC TGCGTGATAA ACCCCTGCAT AACCTGCCCC CCCACCAACG GGGGATCGGT
ATGGTTTTCC AAAATTATGC CCTCTTCCCA CATATGACCG TAACTGAAAA TCTGGCCTTT
CCACTCACGA TCCGCCGATT GAGTAAGGCT GATATCAAAG AGAAAATTGA CCGTATATTG
GATATGGTGA AGTTGAAGAA TTTGGCTGAC CGCTATCCCG CGCAGATGTC TGGTGGGCAG
CAGCAACGGG TTGCATTGGC ACGCGCCTTG GTATTTGAGC CCAAACTGGT GCTGATGGAT
GAACCACTCG GGGCGCTGGA TAAGCAGTTA CGTGAGCATA TGCAATTGGA AATCAAACAG
TTACATAAAA TGCTTGAATT GACCATTGTC TACGTCACCC ATGACCAAAG CGAAGCGATG
ACTCTGTCAA ATCGGGTGGT GGTATTTAAC GATGGTATTA TTCAGCAAAT GGATAGCCCA
AGCGTGATTT ATGAACAGCC AAGCAATACT TTTGTGGCGC AATTTATTGG TGAAAATAAC
TGCTTACTGG CCGTTAATCA GGGCAGTGAC GGGGAATATT ACCGTGCCAT GTTGGACGAT
GGGACCCGCC TGCAAGCATT AAAAGTATGC CCCAGCTCAC CGGGTAAAAA AATTATGTTA
TGTATTCGGC CGGAGCGCGT CAGTGTGAAT CATCCTGCGG TGGGCAGCCA GCAGATCAAG
GCCCGCATTC AGCAATTTAT TTATCTGGGA GACCATGTGC GGATGATGAC GGAGGTTGCA
GGCCAAGGGA ATTTCATGGT GAAACTCTCC GCCGCGCATA TCGAACCACA CTGGCAGCCG
GGAAGTGAGG TGTTGCTGTC GTGGATGCCT GCGCATTTAA GGGCACTGGA GGGGGTGACA
CACTGA
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| Protein sequence | MRTYVSFKNI KKSYDGDKLV VKNLNLDIHE GDFLTLLGPS GSGKTTSLMM LAGFETPTQG
EITLRDKPLH NLPPHQRGIG MVFQNYALFP HMTVTENLAF PLTIRRLSKA DIKEKIDRIL
DMVKLKNLAD RYPAQMSGGQ QQRVALARAL VFEPKLVLMD EPLGALDKQL REHMQLEIKQ
LHKMLELTIV YVTHDQSEAM TLSNRVVVFN DGIIQQMDSP SVIYEQPSNT FVAQFIGENN
CLLAVNQGSD GEYYRAMLDD GTRLQALKVC PSSPGKKIML CIRPERVSVN HPAVGSQQIK
ARIQQFIYLG DHVRMMTEVA GQGNFMVKLS AAHIEPHWQP GSEVLLSWMP AHLRALEGVT
H
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