Gene YPK_1328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1328 
Symbol 
ID6087318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1457693 
End bp1459078 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content52% 
IMG OID641596392 
Productsignal transduction histidine-protein kinase BaeS 
Protein accessionYP_001720075 
Protein GI170023570 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAGGA TCGGCATTAC CGGAAAACTG TTTATGGCTA TTTTCGCCAC TTGCATGTTG 
GTATTGATAA CCATGCACTG GGGCGTCAGG ACCAGTTTTG AACGCGGTTT CATTGACTAC
ATCAAGCAAA GTAATGAACA GCGGATCGCC ATGCTAAGTC ATGCGCTTGA AGGCGAATAT
CAGCACTACG GTAACTGGGA TTTTCTGCGT AATAATGACC AAGTGATTTA CCAGATCATG
CGATCCTTTG AGCAAAACCA AAACAGTGAG AGCAGACCCA GTATGCCGCC CCGTGGCTGG
CGCGCCCAAT TTTGGGTGGT TGATCAAGAC AATAATCTGC TGGTCGGGCA CTCCGGGCAT
CTCCCCACAG AAGCTAGCCG CAGTGCCATA AAAGTCAATG ATCAGGTTGT CGGCTGGGTG
ATTTCGACCC CATCGGAAAA ACTGACCCGT AATGCAGATA TCACCTTTGA TCAACAACAG
CGCCGCACCA GTTGGTTTAT TGTTGGCCTC TCGACGCTGC TGGCGGCCGC CGTCACATGG
GTACTCTCAC GCGGCATGTT AGCCCCAGTA AAACGGCTGG TTGAAGGCAC GCATCGGCTG
GCCGCGGGGG ATTTTAGCAC CCGTGTTGCC GTCAGTAGCC GCGATGAACT GGGCCACCTG
GCACAAGATT TTAACCAGCT AGCCAGTTCA CTGGAAAAAA ATGAACAAAT GCGCCGTGAT
TTTATGGCCG ATGTCTCCCA TGAACTCCGC ACGCCACTGG CAGTATTACG CGGAGAACTG
GAAGCCTTAC AAGACGGCCT GCGCCAACCC ACCCCCGAGT CATTAAGTTC GCTCCAAGCC
GAGGTGGCGA TTTTGACAAA ACTGGTCAAT GACCTGCACC AGTTATCACA GTCTGATCGC
GGGGCGCTGG CTTACCGTAA AACCCAACTG GATGTGGTCC GGCTACTGCA AGTGGCGATT
GCCAGCTTTC ATGGCCGCTT CCAGAACAAA AAGATGACCA TCACCGCCCA CCTGCCTGAA
CACGCGGTTA TTTTTGGCGA CCCTGACCGG CTCAATCAGT TATTTCACAA TTTACTGGAA
AACAGCCTGC GTTATACCAA CGAGGGGGGG GCATTAGAAA TTATCGCGTT GATCCAAGAA
GAGACACTCA CGCTGCACTG GCAAGACAGT AAACCGGGGG TCAGCGATGA ACAGCTCGAG
CGTCTTTTTG AACGTTTTTA TCGTACGGAA AGTTCACGTA ATCGCGCCAG TGGCGGCTCT
GGGTTGGGGT TGGCGATTTG CCATAATATT GTCGATGCGC ATAGTGGAAA AATCAGCGCT
AAACATTCAC CTTTGGGTGG CCTGCGGATT ACGGTAGTAT TCCCCCTATT TCATTCCATA
GGGTAA
 
Protein sequence
MIRIGITGKL FMAIFATCML VLITMHWGVR TSFERGFIDY IKQSNEQRIA MLSHALEGEY 
QHYGNWDFLR NNDQVIYQIM RSFEQNQNSE SRPSMPPRGW RAQFWVVDQD NNLLVGHSGH
LPTEASRSAI KVNDQVVGWV ISTPSEKLTR NADITFDQQQ RRTSWFIVGL STLLAAAVTW
VLSRGMLAPV KRLVEGTHRL AAGDFSTRVA VSSRDELGHL AQDFNQLASS LEKNEQMRRD
FMADVSHELR TPLAVLRGEL EALQDGLRQP TPESLSSLQA EVAILTKLVN DLHQLSQSDR
GALAYRKTQL DVVRLLQVAI ASFHGRFQNK KMTITAHLPE HAVIFGDPDR LNQLFHNLLE
NSLRYTNEGG ALEIIALIQE ETLTLHWQDS KPGVSDEQLE RLFERFYRTE SSRNRASGGS
GLGLAICHNI VDAHSGKISA KHSPLGGLRI TVVFPLFHSI G