Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1327 |
Symbol | |
ID | 6090832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1456964 |
End bp | 1457683 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641596391 |
Product | DNA-binding transcriptional regulator BaeR |
Protein accession | YP_001720074 |
Protein GI | 170023569 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACGAGT CGCTTCTGTC TGCCAGCCAG TCTGGCTCTG TATTGATCGT TGAAGATGAA CCCAAACTTG GCCAGCTACT CGTCGATTAC CTGCAAGCCG CGGGTTACCG CACCCAGTGG CTGACCAACG GGGCAGAAGT CGTGGCGACG GTTCGCCAAA CGCCACCCGC CATCATCTTG CTGGATCTCA TGCTGCCCGG CAGTGATGGC ATCACCCTAT GCCGTGAAAT CCGCCGCTTC TCTGATATTC CTATTGTCAT GGTGACGGCA AAAACGGAAG AGATTGATAG GCTATTGGGG CTAGAAATTG GCGCTGATGA TTATATCTGC AAGCCCTATA GCCCACGGGA AGTGGTCGCT CGGGTCAAAA CCATTTTACG CCGCTGCTCT CAGCAACGTC ATCAACCCAC CGATGACGCA CCACTGCTGA TCAATGAATC CCGTTTTCAG GCGAGTTACC AAGGGCATAT GCTGGAATTA ACCCCGGCAG AATTCCGCTT ACTGAAAATA TTAGCCTCCC AACCGGGCCA TGTTTTCAGC CGGGAACAAC TGCTGAACAA CCTTTACGAC GATTACCGGG TAGTGACTGA TCGCACCATT GACAGCCATA TCAAAAATCT ACGGCGGAAA CTGGAATTAC TCGATGGCGA AAAACCGTTC ATCCGCGCGG TATATGGCAT GGGGTATCGC TGGGAAGCAG AGATGTGCCG TTTGTTGTAA
|
Protein sequence | MHESLLSASQ SGSVLIVEDE PKLGQLLVDY LQAAGYRTQW LTNGAEVVAT VRQTPPAIIL LDLMLPGSDG ITLCREIRRF SDIPIVMVTA KTEEIDRLLG LEIGADDYIC KPYSPREVVA RVKTILRRCS QQRHQPTDDA PLLINESRFQ ASYQGHMLEL TPAEFRLLKI LASQPGHVFS REQLLNNLYD DYRVVTDRTI DSHIKNLRRK LELLDGEKPF IRAVYGMGYR WEAEMCRLL
|
| |