Gene YPK_1327 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1327 
Symbol 
ID6090832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1456964 
End bp1457683 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content53% 
IMG OID641596391 
ProductDNA-binding transcriptional regulator BaeR 
Protein accessionYP_001720074 
Protein GI170023569 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACGAGT CGCTTCTGTC TGCCAGCCAG TCTGGCTCTG TATTGATCGT TGAAGATGAA 
CCCAAACTTG GCCAGCTACT CGTCGATTAC CTGCAAGCCG CGGGTTACCG CACCCAGTGG
CTGACCAACG GGGCAGAAGT CGTGGCGACG GTTCGCCAAA CGCCACCCGC CATCATCTTG
CTGGATCTCA TGCTGCCCGG CAGTGATGGC ATCACCCTAT GCCGTGAAAT CCGCCGCTTC
TCTGATATTC CTATTGTCAT GGTGACGGCA AAAACGGAAG AGATTGATAG GCTATTGGGG
CTAGAAATTG GCGCTGATGA TTATATCTGC AAGCCCTATA GCCCACGGGA AGTGGTCGCT
CGGGTCAAAA CCATTTTACG CCGCTGCTCT CAGCAACGTC ATCAACCCAC CGATGACGCA
CCACTGCTGA TCAATGAATC CCGTTTTCAG GCGAGTTACC AAGGGCATAT GCTGGAATTA
ACCCCGGCAG AATTCCGCTT ACTGAAAATA TTAGCCTCCC AACCGGGCCA TGTTTTCAGC
CGGGAACAAC TGCTGAACAA CCTTTACGAC GATTACCGGG TAGTGACTGA TCGCACCATT
GACAGCCATA TCAAAAATCT ACGGCGGAAA CTGGAATTAC TCGATGGCGA AAAACCGTTC
ATCCGCGCGG TATATGGCAT GGGGTATCGC TGGGAAGCAG AGATGTGCCG TTTGTTGTAA
 
Protein sequence
MHESLLSASQ SGSVLIVEDE PKLGQLLVDY LQAAGYRTQW LTNGAEVVAT VRQTPPAIIL 
LDLMLPGSDG ITLCREIRRF SDIPIVMVTA KTEEIDRLLG LEIGADDYIC KPYSPREVVA
RVKTILRRCS QQRHQPTDDA PLLINESRFQ ASYQGHMLEL TPAEFRLLKI LASQPGHVFS
REQLLNNLYD DYRVVTDRTI DSHIKNLRRK LELLDGEKPF IRAVYGMGYR WEAEMCRLL