Gene YPK_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1315 
Symbol 
ID6091252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1441580 
End bp1447510 
Gene Length5931 bp 
Protein Length1976 aa 
Translation table11 
GC content56% 
IMG OID641596381 
ProductIg domain-containing protein 
Protein accessionYP_001720064 
Protein GI170023559 
COG category 
COG ID 
TIGRFAM ID[TIGR01451] conserved repeat domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.454335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAT ATTTTTCTTT TTTTAAAAAA CCAGAGCCTA TTGTCGGTAT TTTACCGAAC 
AGACAAAGTC ATCATATTCT CCCAACCCAC ATCAGACGGG TTGCCTGGGG CACTCTGCTA
TTACAATTAT TTATCCCGCT GAGCGTCTCT TTCTCACCGG CAATTGCGGC AATGAAGGCG
TCAAAAGCCG ACACAATGGT CTCCTATTCA TCTACTGAGC CTTATGTGCT GGGATCGGGT
GAAACGGTCG CTATGGTGGC GAAAAAATAC GGGATTACCG TTGATGAACT CAAAAAAATA
AATATTTATC GGACTTTTTC CCGTCCCTTC ACTGCCCTGA CAACGGGCGA TGAAATTGAT
ATCCCCCGTA AAGCCTCTCC CTTCTCGGTT GATAACAATA AAGACAACAG ACTTTCAGTA
GAAAATACAT TAGCCGGTCA TGCAGTGGCG GGTGCCACTG CCTTATCCAA CGGTGATGTC
GCTAAATCCG GTGAGCGGAT GGTGCGTTCT GCGGCCAGCA ATGAATTCAA TAACTCAGCA
CAACAGTGGC TGAGCCAGTT CGGTACTGCT CGCGTACAGT TGAATATTAA TGATGACTTC
CATCTGGACG GCAGCGCGGC CGATGTCTTG ATCCCGCTAT ACGATAATGA GAAATCCATT
CTCTTTACCC AACTCGGTGC CCGCAATAAA GACAGCCGCA ATACGGTCAA TATGGGGGCC
GGGGTGCGTA CCTTCCAGGG GAACTGGATG TATGGTGCCA ATACCTTCTT TGATAATGAT
CTCACCGGTA AAAACCGGCG GATCGGTGTG GGCGCAGAAG CCTGGACTGA TTATCTGAAA
TTGTCCGCCA ACAACTATTT TGGTATCACG GACTGGCACC AGTCCCGGGA CTTTATCGAT
TATAACGAAC GCCCGGCCAA CGGTTATGAC CTGCGTGCGG AAGCTTATTT ACCGTCGTAT
CCCCAGTTAG GTGGTAAGGC GATGTATGAA AAATACCGGG GTGATGATGT CGCGCTGTTT
GGCAAAGATA ACCGCCAGAA AAATCCGCAC GCCATTACTG CGGGAGTGAA TTATACCCCC
ATCCCATTAG TGACTATTGG CGCTGAACAT CGCGCCGGTA AAGGTGGGCA AAATGACAGC
AATATCAACT TCCAATTGAA TTATCGCCTG GGTGAAACGT GGCAATCCCA TATCGACCCT
TCAGCCGTTG CAGCGAGCCG CACACTGGCC GGGAGTCGCT ATGATTTGGT TGAACGTAAC
AATCATATTG TGCTGGATTA CCAGAAGCAG AATTTGGTGC GGTTGTCCTT ACCGGACAGT
CTGGCGGGCG ATCCTTTCTC GCAGCTCTCC GTCACCGCGC AAGTGACGGC AACACACGGG
CTTGAGCGTA TAGATTGGCA AAGTGCAGAG CTGATGGCGG CAGGTGGCGT GTTAAAACAA
ACCAGCAAAA ATGGGCTGGA GATAACGCTG CCTGAGTATC AGATGAACAG AACCGGTGGT
AACAGTTATA TTCTGAACGC CATCGCCTAT GACACCCAAG GTAATGCTTC CAGTCAGGCA
AGCATGCTTA TCACGGTGAA TGCACAAAAA ATAAACATTG CCAACTCTAC GTTGGTGGCA
GTGCCGATCA ATATCGAAGC CAATAACAGC GACACCTCGG TGGTGACGCT GACGCTGAAA
GACGACAACA ATATCCCGGT AACTGGCCAA GATGTGACCT TTCTTAGTCC CCTGGGAACA
CTGAGTGCCA TGACCGATAG CGGCAACGGT GTCTACACCG CGACCCTGAC GGCGGGAACG
GTATCGGGCA CCACCGCAGT CAGCTCGAAT ATCAACGGCA GTGCGCTGGA CATGACCCCA
GCTACGGTGA CCCTGAACGG CAACAGTGGC GAACTGAGCA TCACCCACTC TATGTTGGTG
GCAGCGCCAG TCAATATCGA AGCCAATGGC AGTGACACCT CGGTGGTGAC GCTGACACTG
CGTGACAGCA ACAACAACCC GGTCACCGGA CAGACAGTGA CCTTTGCCGG GACGCTCGGC
ACCCTTGGCG CAGTTACTGA GGGTAGCAGT GGTGTCTACA CCGCCACCCT GACCGCCGGG
ATCATGGTGG GGACGTCCAG TATCACCGCC AGTGTGAACA GCACCGCGCT GGGCGTGACG
CCGGCCACCG TGACCCTGAA CGGCGACAGC GGCAACCTGA GCACCACGAA CTCCACCCTG
GTGGCAGCGC CAGTCAATAT CGAAGCCAAT AGCAGCGACA CTTCGGTGGT GACGTTGACA
TTGCGTGATA ACAACAACAA CCCGGTTACC GGTCAAACGG TCGTCTTTAC CAGCACCCTC
GGGACGCTGG GCAATGTGAC CGAGCAGGCC AGTGGTGTGT ATACCGCGAC CCTGACGGCC
GGCACCGTAT CCGGTGTCGC CAGCCTGAGT GTCAGTGTGG GCGGCAATGC GCTGGGCGTG
ACACCAGCCA CCGTGACCCT GAACGGCGAC AGCGGTAATC TGAGCACCAC GAACTCCACG
TTGGTGGCAG CGCCAGTCAA TATCGAAGCC AATAGCAGCG ACACCTCGGT GGTGACGTTG
ACATTGCGTG ATAACAACAA CAACCCGGTC ACCGGACAGA CGGTGAACTT TGCCGGGACG
CTGGGCACCC TTGGGACGGT AAGTGAAGGC AGTAGCGGGG TTTATACCAC GACCCTGACG
GCGGGGACCG TAGCCGGTGT CGCCAGCCTG AGTGTCAATG TGGGCGGCAA TGCGCTGGGC
GTGACGCCAG CCACCGTGAC CCTGAACGGC AACAGCGGCA ACCTGAGCGC TACGAACTCC
ACGTTGGTGG CAGCGCCGGT CAATATCGAA GCCAATAGCA GCGACACCTC GGTGGTGACG
TTGACATTGC GTGATAACAA CAACAACCCG GTTACCGGTC AAACGGTCGC CTTTACCAGC
ACCCTCGGGA CGCTGGGCAA TGTGACCGAG CAGGCCAGCG GTGTGTATAC CGCGACCCTG
ACGGCGGGGA CCGTTTCCGG TGTCGCCAGC CTGAGTGTCA GTGTGAACAG CAATGCGCTG
GGCGTGACGC CGGCCACCGT GACCCTGAAC GGCGACAGCG GCAACCTGAG CACCACGAAC
TCCACGTTGG TGGCAGCCCC AGTCAATATC GAAGCCAATA GCAGCGACAC CTCGGTGGTG
ACGTTGACAT TGCGTGATAA CAACAACAAC CCGGTCACCG GGCAGACGGT CGCCTTTACC
AGCACCCTCG GGACGCTGGG CAATGTGACC GAGCAGGCCA GCGGCCTCTA TACCGCGACC
CTGACCGCCG GCACCGTATC CGGTGTCGCC AGCCTGAGTG TCAATGTGGG CGGCAATGCG
CTGGGCGTGA CGCCAGCCAC CGTGACCCTG AACGGCGACA GCGGCAACCT GAGCGCCACG
AACTCCACCC TGGTGGCAGC GCCAGTCAAT ATCGAAGCCA ATAGCAGCGA CACCTCGGTG
GTGACGTTGA CATTGCGTGA TAACAACAAC AACCCGGTTA CCGGTCAAAC GGTCGCCTTT
ACCAGCACCC TCGGGACGCT GGGCAATGTG ACCGAGCAGG CCAGCGGCCT CTATACCGCG
ACCCTGACCG CCGGCACCGT ATCCGGTGTC GCCAGCCTGA GTGTCAATGT GGGCGGCACC
GCGCTGGGCG TGACGCCGGC CACCGTGACC CTGAACGGCG ACAGCGGCAA CCTGAGCACC
ACGAACTCCA CGTTGGTGGC AGCGCCAGTC AATATCGAAG CCAATAGCAG CGACACTTCG
GTGGTGACGT TGACATTGCG TGATAACAAC AACAACCCGG TTACCGGTCA AACGGTCGCC
TTTACCAGCA CCCTCGGGAC GCTGGGCAAT GTGACCGAGC AGGCCAGCGG CCTCTATACC
GCGACCCTGA CCGCCGGCAC CGTATCCGGT GTCGCCAGCC TGAGTGTCAG TGTGAACAGC
ACCGCGCTGG GCGTGACACC AGCCACCGTG ACCCTGAACG GCGACAGCGG CAACCTGAGC
ACCACGAACT CCACGTTGGT GGCAGCGCCA GTCAATATCG AAGCCAATAG CAGCGACACT
TCGGTGGTGA CGTTGACATT GCGTGATAAC AACAACAACC CGGTCACCGG TCAAACGGTC
GCCTTTACCA GCACCCTCGG GACGCTGGGC AATGTGACCG AGCAGGCCAG TGGTGTGTAT
ACCGCGACCC TGACCGCCGG CACCGTAGCC GGTGTCGCCA GCCTGAGTGT CAATGTGGGC
GGCAATGCGC TGGGCGTGAC GCCAGCCACC GTGACCCTGA ACGGCGACAG CGGCAACCTG
AGCACCACGA ACTCCACGTT GGTGGCAGCG CCAGTCAATA TCGAAGCCAA TAGCAGCGAC
ACTTCGGTGG TGACGTTGAC ATTGCGTGAT AACAACAACA ACCCGGTCAC CGGTCAAACG
GTCGCCTTTA CCAGCACCCT CGGGACGCTG GGCAATGTGA CCGAGCAGGC CAGTGGTGTG
TATACCGCGA CCCTGACCGC CGGCACCGTA TCCGGTGTCG CCAGCCTGAG TGTCAGTGTG
GGCAGCAGTG CGCTGGGCGT GACGCCAGCC ACCGTGACCC TGAACGGCGA CAGCGGCAAC
CTGAGCACCA CGAACTCCAC GTTGGTGGCA GCACCAGTCA ATATCGAAGC CAATAACAGT
GACACCTCGG TGGTGACGTT GACATTGCGT GATAACAACA ACAACCCGGT TACCGGTCAA
ACGGTCGCCT TTACCAGCAC CCTCGGGACG CTGGGCAATG TGACCGAGCA GGCCAGCGGT
GTGTATACCG CGACCCTGAC GGCGGGGACC GTTTCCGGTG TCGCCAGCCT GAGTGTCAGT
GTGAACAGCA ATGCGCTGGG CGTGACGCCG GCCACCGTGA CCCTGAACGG CGACAGCGGC
AACCTGAGCA CCACGAACTC CACGTTGGTG GCAGCCCCAG TCAATATCGA AGCCAATAGC
AGCGACACCT CGGTGGTGAC GTTGACATTG CGTGATAACA ACAACAACCC GGTCACCGGT
CAAACGGTCG TCTTTACCAG CACCCTCGGG ACGCTGGGCA ATGTGACCGA GCAGGCCAGC
GGCCTCTATA CCGCCACCCT GACGGCCGGT ACCGTATCCG GTGTCGCCAG CCTGAGTGTC
AGTGTGGGCG GCAATGCGCT GGGCGTGACA GGCAACATCA CACTGGCACC TGGTGCATTA
GATGCTGCGC GCTCAATATT GGCAGTGAAC AAACCTAGCA TTAACGCCGA TGACCGAATT
GGCTCCACCA TTACCTTTAC CGCACAGGAT GCGCAAGGTA ATGCCATTAC CGGTCTGGAC
ATTGCGTTTA TGACTGACTT GGAAAATAGC CAGATAATGA CGTTAGTAGA CCATAATGAT
GGTACCTATA CGGCGAATAT TAATGGTACC CAAACGGGTA TCGCAAATAT TGCGGTACAG
TCATCAGGTG CCACGATCGC GGGGCTCGCT GCAACGATGG TGACAATAAC GCCGGGGGCA
TGGAATACAA CACAAGCAAC CCCTGTCATG ACAGTGGCTC TACCTATTAC GACATGCCAG
TCAAGCTCTG GTGTTTATAA GCGGTATTAT ATAGGGATTG TAACTCACGA ATTGTACGAT
AATTACGGTA ATGAGATTAG CGGGATACTT ACCTATAATC TTGGTGCAGG AAGGTATACG
ACGGTCACAT CTCAAAATTC ATCTGTATCT GGGTCTAATG GGCTAACACG GAGAAGCAAT
AGTCCTGTCA GTCATTTTAT CTTAACTTCT GATGCTTATA CCAGTCAGGC AGCCTGTTAT
GCCGAGAGAA TTGCAAATGT AAATGTAACG ATAACGGTTA CTGCAATTAC AGATGACTTC
AAGACATCCG CTGTTAATAA AGTCTTTATT TTAGGAACCG GATCTAACTA A
 
Protein sequence
MIKYFSFFKK PEPIVGILPN RQSHHILPTH IRRVAWGTLL LQLFIPLSVS FSPAIAAMKA 
SKADTMVSYS STEPYVLGSG ETVAMVAKKY GITVDELKKI NIYRTFSRPF TALTTGDEID
IPRKASPFSV DNNKDNRLSV ENTLAGHAVA GATALSNGDV AKSGERMVRS AASNEFNNSA
QQWLSQFGTA RVQLNINDDF HLDGSAADVL IPLYDNEKSI LFTQLGARNK DSRNTVNMGA
GVRTFQGNWM YGANTFFDND LTGKNRRIGV GAEAWTDYLK LSANNYFGIT DWHQSRDFID
YNERPANGYD LRAEAYLPSY PQLGGKAMYE KYRGDDVALF GKDNRQKNPH AITAGVNYTP
IPLVTIGAEH RAGKGGQNDS NINFQLNYRL GETWQSHIDP SAVAASRTLA GSRYDLVERN
NHIVLDYQKQ NLVRLSLPDS LAGDPFSQLS VTAQVTATHG LERIDWQSAE LMAAGGVLKQ
TSKNGLEITL PEYQMNRTGG NSYILNAIAY DTQGNASSQA SMLITVNAQK INIANSTLVA
VPINIEANNS DTSVVTLTLK DDNNIPVTGQ DVTFLSPLGT LSAMTDSGNG VYTATLTAGT
VSGTTAVSSN INGSALDMTP ATVTLNGNSG ELSITHSMLV AAPVNIEANG SDTSVVTLTL
RDSNNNPVTG QTVTFAGTLG TLGAVTEGSS GVYTATLTAG IMVGTSSITA SVNSTALGVT
PATVTLNGDS GNLSTTNSTL VAAPVNIEAN SSDTSVVTLT LRDNNNNPVT GQTVVFTSTL
GTLGNVTEQA SGVYTATLTA GTVSGVASLS VSVGGNALGV TPATVTLNGD SGNLSTTNST
LVAAPVNIEA NSSDTSVVTL TLRDNNNNPV TGQTVNFAGT LGTLGTVSEG SSGVYTTTLT
AGTVAGVASL SVNVGGNALG VTPATVTLNG NSGNLSATNS TLVAAPVNIE ANSSDTSVVT
LTLRDNNNNP VTGQTVAFTS TLGTLGNVTE QASGVYTATL TAGTVSGVAS LSVSVNSNAL
GVTPATVTLN GDSGNLSTTN STLVAAPVNI EANSSDTSVV TLTLRDNNNN PVTGQTVAFT
STLGTLGNVT EQASGLYTAT LTAGTVSGVA SLSVNVGGNA LGVTPATVTL NGDSGNLSAT
NSTLVAAPVN IEANSSDTSV VTLTLRDNNN NPVTGQTVAF TSTLGTLGNV TEQASGLYTA
TLTAGTVSGV ASLSVNVGGT ALGVTPATVT LNGDSGNLST TNSTLVAAPV NIEANSSDTS
VVTLTLRDNN NNPVTGQTVA FTSTLGTLGN VTEQASGLYT ATLTAGTVSG VASLSVSVNS
TALGVTPATV TLNGDSGNLS TTNSTLVAAP VNIEANSSDT SVVTLTLRDN NNNPVTGQTV
AFTSTLGTLG NVTEQASGVY TATLTAGTVA GVASLSVNVG GNALGVTPAT VTLNGDSGNL
STTNSTLVAA PVNIEANSSD TSVVTLTLRD NNNNPVTGQT VAFTSTLGTL GNVTEQASGV
YTATLTAGTV SGVASLSVSV GSSALGVTPA TVTLNGDSGN LSTTNSTLVA APVNIEANNS
DTSVVTLTLR DNNNNPVTGQ TVAFTSTLGT LGNVTEQASG VYTATLTAGT VSGVASLSVS
VNSNALGVTP ATVTLNGDSG NLSTTNSTLV AAPVNIEANS SDTSVVTLTL RDNNNNPVTG
QTVVFTSTLG TLGNVTEQAS GLYTATLTAG TVSGVASLSV SVGGNALGVT GNITLAPGAL
DAARSILAVN KPSINADDRI GSTITFTAQD AQGNAITGLD IAFMTDLENS QIMTLVDHND
GTYTANINGT QTGIANIAVQ SSGATIAGLA ATMVTITPGA WNTTQATPVM TVALPITTCQ
SSSGVYKRYY IGIVTHELYD NYGNEISGIL TYNLGAGRYT TVTSQNSSVS GSNGLTRRSN
SPVSHFILTS DAYTSQAACY AERIANVNVT ITVTAITDDF KTSAVNKVFI LGTGSN