Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1315 |
Symbol | |
ID | 6091252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1441580 |
End bp | 1447510 |
Gene Length | 5931 bp |
Protein Length | 1976 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 641596381 |
Product | Ig domain-containing protein |
Protein accession | YP_001720064 |
Protein GI | 170023559 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01451] conserved repeat domain |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.454335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAAAT ATTTTTCTTT TTTTAAAAAA CCAGAGCCTA TTGTCGGTAT TTTACCGAAC AGACAAAGTC ATCATATTCT CCCAACCCAC ATCAGACGGG TTGCCTGGGG CACTCTGCTA TTACAATTAT TTATCCCGCT GAGCGTCTCT TTCTCACCGG CAATTGCGGC AATGAAGGCG TCAAAAGCCG ACACAATGGT CTCCTATTCA TCTACTGAGC CTTATGTGCT GGGATCGGGT GAAACGGTCG CTATGGTGGC GAAAAAATAC GGGATTACCG TTGATGAACT CAAAAAAATA AATATTTATC GGACTTTTTC CCGTCCCTTC ACTGCCCTGA CAACGGGCGA TGAAATTGAT ATCCCCCGTA AAGCCTCTCC CTTCTCGGTT GATAACAATA AAGACAACAG ACTTTCAGTA GAAAATACAT TAGCCGGTCA TGCAGTGGCG GGTGCCACTG CCTTATCCAA CGGTGATGTC GCTAAATCCG GTGAGCGGAT GGTGCGTTCT GCGGCCAGCA ATGAATTCAA TAACTCAGCA CAACAGTGGC TGAGCCAGTT CGGTACTGCT CGCGTACAGT TGAATATTAA TGATGACTTC CATCTGGACG GCAGCGCGGC CGATGTCTTG ATCCCGCTAT ACGATAATGA GAAATCCATT CTCTTTACCC AACTCGGTGC CCGCAATAAA GACAGCCGCA ATACGGTCAA TATGGGGGCC GGGGTGCGTA CCTTCCAGGG GAACTGGATG TATGGTGCCA ATACCTTCTT TGATAATGAT CTCACCGGTA AAAACCGGCG GATCGGTGTG GGCGCAGAAG CCTGGACTGA TTATCTGAAA TTGTCCGCCA ACAACTATTT TGGTATCACG GACTGGCACC AGTCCCGGGA CTTTATCGAT TATAACGAAC GCCCGGCCAA CGGTTATGAC CTGCGTGCGG AAGCTTATTT ACCGTCGTAT CCCCAGTTAG GTGGTAAGGC GATGTATGAA AAATACCGGG GTGATGATGT CGCGCTGTTT GGCAAAGATA ACCGCCAGAA AAATCCGCAC GCCATTACTG CGGGAGTGAA TTATACCCCC ATCCCATTAG TGACTATTGG CGCTGAACAT CGCGCCGGTA AAGGTGGGCA AAATGACAGC AATATCAACT TCCAATTGAA TTATCGCCTG GGTGAAACGT GGCAATCCCA TATCGACCCT TCAGCCGTTG CAGCGAGCCG CACACTGGCC GGGAGTCGCT ATGATTTGGT TGAACGTAAC AATCATATTG TGCTGGATTA CCAGAAGCAG AATTTGGTGC GGTTGTCCTT ACCGGACAGT CTGGCGGGCG ATCCTTTCTC GCAGCTCTCC GTCACCGCGC AAGTGACGGC AACACACGGG CTTGAGCGTA TAGATTGGCA AAGTGCAGAG CTGATGGCGG CAGGTGGCGT GTTAAAACAA ACCAGCAAAA ATGGGCTGGA GATAACGCTG CCTGAGTATC AGATGAACAG AACCGGTGGT AACAGTTATA TTCTGAACGC CATCGCCTAT GACACCCAAG GTAATGCTTC CAGTCAGGCA AGCATGCTTA TCACGGTGAA TGCACAAAAA ATAAACATTG CCAACTCTAC GTTGGTGGCA GTGCCGATCA ATATCGAAGC CAATAACAGC GACACCTCGG TGGTGACGCT GACGCTGAAA GACGACAACA ATATCCCGGT AACTGGCCAA GATGTGACCT TTCTTAGTCC CCTGGGAACA CTGAGTGCCA TGACCGATAG CGGCAACGGT GTCTACACCG CGACCCTGAC GGCGGGAACG GTATCGGGCA CCACCGCAGT CAGCTCGAAT ATCAACGGCA GTGCGCTGGA CATGACCCCA GCTACGGTGA CCCTGAACGG CAACAGTGGC GAACTGAGCA TCACCCACTC TATGTTGGTG GCAGCGCCAG TCAATATCGA AGCCAATGGC AGTGACACCT CGGTGGTGAC GCTGACACTG CGTGACAGCA ACAACAACCC GGTCACCGGA CAGACAGTGA CCTTTGCCGG GACGCTCGGC ACCCTTGGCG CAGTTACTGA GGGTAGCAGT GGTGTCTACA CCGCCACCCT GACCGCCGGG ATCATGGTGG GGACGTCCAG TATCACCGCC AGTGTGAACA GCACCGCGCT GGGCGTGACG CCGGCCACCG TGACCCTGAA CGGCGACAGC GGCAACCTGA GCACCACGAA CTCCACCCTG GTGGCAGCGC CAGTCAATAT CGAAGCCAAT AGCAGCGACA CTTCGGTGGT GACGTTGACA TTGCGTGATA ACAACAACAA CCCGGTTACC GGTCAAACGG TCGTCTTTAC CAGCACCCTC GGGACGCTGG GCAATGTGAC CGAGCAGGCC AGTGGTGTGT ATACCGCGAC CCTGACGGCC GGCACCGTAT CCGGTGTCGC CAGCCTGAGT GTCAGTGTGG GCGGCAATGC GCTGGGCGTG ACACCAGCCA CCGTGACCCT GAACGGCGAC AGCGGTAATC TGAGCACCAC GAACTCCACG TTGGTGGCAG CGCCAGTCAA TATCGAAGCC AATAGCAGCG ACACCTCGGT GGTGACGTTG ACATTGCGTG ATAACAACAA CAACCCGGTC ACCGGACAGA CGGTGAACTT TGCCGGGACG CTGGGCACCC TTGGGACGGT AAGTGAAGGC AGTAGCGGGG TTTATACCAC GACCCTGACG GCGGGGACCG TAGCCGGTGT CGCCAGCCTG AGTGTCAATG TGGGCGGCAA TGCGCTGGGC GTGACGCCAG CCACCGTGAC CCTGAACGGC AACAGCGGCA ACCTGAGCGC TACGAACTCC ACGTTGGTGG CAGCGCCGGT CAATATCGAA GCCAATAGCA GCGACACCTC GGTGGTGACG TTGACATTGC GTGATAACAA CAACAACCCG GTTACCGGTC AAACGGTCGC CTTTACCAGC ACCCTCGGGA CGCTGGGCAA TGTGACCGAG CAGGCCAGCG GTGTGTATAC CGCGACCCTG ACGGCGGGGA CCGTTTCCGG TGTCGCCAGC CTGAGTGTCA GTGTGAACAG CAATGCGCTG GGCGTGACGC CGGCCACCGT GACCCTGAAC GGCGACAGCG GCAACCTGAG CACCACGAAC TCCACGTTGG TGGCAGCCCC AGTCAATATC GAAGCCAATA GCAGCGACAC CTCGGTGGTG ACGTTGACAT TGCGTGATAA CAACAACAAC CCGGTCACCG GGCAGACGGT CGCCTTTACC AGCACCCTCG GGACGCTGGG CAATGTGACC GAGCAGGCCA GCGGCCTCTA TACCGCGACC CTGACCGCCG GCACCGTATC CGGTGTCGCC AGCCTGAGTG TCAATGTGGG CGGCAATGCG CTGGGCGTGA CGCCAGCCAC CGTGACCCTG AACGGCGACA GCGGCAACCT GAGCGCCACG AACTCCACCC TGGTGGCAGC GCCAGTCAAT ATCGAAGCCA ATAGCAGCGA CACCTCGGTG GTGACGTTGA CATTGCGTGA TAACAACAAC AACCCGGTTA CCGGTCAAAC GGTCGCCTTT ACCAGCACCC TCGGGACGCT GGGCAATGTG ACCGAGCAGG CCAGCGGCCT CTATACCGCG ACCCTGACCG CCGGCACCGT ATCCGGTGTC GCCAGCCTGA GTGTCAATGT GGGCGGCACC GCGCTGGGCG TGACGCCGGC CACCGTGACC CTGAACGGCG ACAGCGGCAA CCTGAGCACC ACGAACTCCA CGTTGGTGGC AGCGCCAGTC AATATCGAAG CCAATAGCAG CGACACTTCG GTGGTGACGT TGACATTGCG TGATAACAAC AACAACCCGG TTACCGGTCA AACGGTCGCC TTTACCAGCA CCCTCGGGAC GCTGGGCAAT GTGACCGAGC AGGCCAGCGG CCTCTATACC GCGACCCTGA CCGCCGGCAC CGTATCCGGT GTCGCCAGCC TGAGTGTCAG TGTGAACAGC ACCGCGCTGG GCGTGACACC AGCCACCGTG ACCCTGAACG GCGACAGCGG CAACCTGAGC ACCACGAACT CCACGTTGGT GGCAGCGCCA GTCAATATCG AAGCCAATAG CAGCGACACT TCGGTGGTGA CGTTGACATT GCGTGATAAC AACAACAACC CGGTCACCGG TCAAACGGTC GCCTTTACCA GCACCCTCGG GACGCTGGGC AATGTGACCG AGCAGGCCAG TGGTGTGTAT ACCGCGACCC TGACCGCCGG CACCGTAGCC GGTGTCGCCA GCCTGAGTGT CAATGTGGGC GGCAATGCGC TGGGCGTGAC GCCAGCCACC GTGACCCTGA ACGGCGACAG CGGCAACCTG AGCACCACGA ACTCCACGTT GGTGGCAGCG CCAGTCAATA TCGAAGCCAA TAGCAGCGAC ACTTCGGTGG TGACGTTGAC ATTGCGTGAT AACAACAACA ACCCGGTCAC CGGTCAAACG GTCGCCTTTA CCAGCACCCT CGGGACGCTG GGCAATGTGA CCGAGCAGGC CAGTGGTGTG TATACCGCGA CCCTGACCGC CGGCACCGTA TCCGGTGTCG CCAGCCTGAG TGTCAGTGTG GGCAGCAGTG CGCTGGGCGT GACGCCAGCC ACCGTGACCC TGAACGGCGA CAGCGGCAAC CTGAGCACCA CGAACTCCAC GTTGGTGGCA GCACCAGTCA ATATCGAAGC CAATAACAGT GACACCTCGG TGGTGACGTT GACATTGCGT GATAACAACA ACAACCCGGT TACCGGTCAA ACGGTCGCCT TTACCAGCAC CCTCGGGACG CTGGGCAATG TGACCGAGCA GGCCAGCGGT GTGTATACCG CGACCCTGAC GGCGGGGACC GTTTCCGGTG TCGCCAGCCT GAGTGTCAGT GTGAACAGCA ATGCGCTGGG CGTGACGCCG GCCACCGTGA CCCTGAACGG CGACAGCGGC AACCTGAGCA CCACGAACTC CACGTTGGTG GCAGCCCCAG TCAATATCGA AGCCAATAGC AGCGACACCT CGGTGGTGAC GTTGACATTG CGTGATAACA ACAACAACCC GGTCACCGGT CAAACGGTCG TCTTTACCAG CACCCTCGGG ACGCTGGGCA ATGTGACCGA GCAGGCCAGC GGCCTCTATA CCGCCACCCT GACGGCCGGT ACCGTATCCG GTGTCGCCAG CCTGAGTGTC AGTGTGGGCG GCAATGCGCT GGGCGTGACA GGCAACATCA CACTGGCACC TGGTGCATTA GATGCTGCGC GCTCAATATT GGCAGTGAAC AAACCTAGCA TTAACGCCGA TGACCGAATT GGCTCCACCA TTACCTTTAC CGCACAGGAT GCGCAAGGTA ATGCCATTAC CGGTCTGGAC ATTGCGTTTA TGACTGACTT GGAAAATAGC CAGATAATGA CGTTAGTAGA CCATAATGAT GGTACCTATA CGGCGAATAT TAATGGTACC CAAACGGGTA TCGCAAATAT TGCGGTACAG TCATCAGGTG CCACGATCGC GGGGCTCGCT GCAACGATGG TGACAATAAC GCCGGGGGCA TGGAATACAA CACAAGCAAC CCCTGTCATG ACAGTGGCTC TACCTATTAC GACATGCCAG TCAAGCTCTG GTGTTTATAA GCGGTATTAT ATAGGGATTG TAACTCACGA ATTGTACGAT AATTACGGTA ATGAGATTAG CGGGATACTT ACCTATAATC TTGGTGCAGG AAGGTATACG ACGGTCACAT CTCAAAATTC ATCTGTATCT GGGTCTAATG GGCTAACACG GAGAAGCAAT AGTCCTGTCA GTCATTTTAT CTTAACTTCT GATGCTTATA CCAGTCAGGC AGCCTGTTAT GCCGAGAGAA TTGCAAATGT AAATGTAACG ATAACGGTTA CTGCAATTAC AGATGACTTC AAGACATCCG CTGTTAATAA AGTCTTTATT TTAGGAACCG GATCTAACTA A
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Protein sequence | MIKYFSFFKK PEPIVGILPN RQSHHILPTH IRRVAWGTLL LQLFIPLSVS FSPAIAAMKA SKADTMVSYS STEPYVLGSG ETVAMVAKKY GITVDELKKI NIYRTFSRPF TALTTGDEID IPRKASPFSV DNNKDNRLSV ENTLAGHAVA GATALSNGDV AKSGERMVRS AASNEFNNSA QQWLSQFGTA RVQLNINDDF HLDGSAADVL IPLYDNEKSI LFTQLGARNK DSRNTVNMGA GVRTFQGNWM YGANTFFDND LTGKNRRIGV GAEAWTDYLK LSANNYFGIT DWHQSRDFID YNERPANGYD LRAEAYLPSY PQLGGKAMYE KYRGDDVALF GKDNRQKNPH AITAGVNYTP IPLVTIGAEH RAGKGGQNDS NINFQLNYRL GETWQSHIDP SAVAASRTLA GSRYDLVERN NHIVLDYQKQ NLVRLSLPDS LAGDPFSQLS VTAQVTATHG LERIDWQSAE LMAAGGVLKQ TSKNGLEITL PEYQMNRTGG NSYILNAIAY DTQGNASSQA SMLITVNAQK INIANSTLVA VPINIEANNS DTSVVTLTLK DDNNIPVTGQ DVTFLSPLGT LSAMTDSGNG VYTATLTAGT VSGTTAVSSN INGSALDMTP ATVTLNGNSG ELSITHSMLV AAPVNIEANG SDTSVVTLTL RDSNNNPVTG QTVTFAGTLG TLGAVTEGSS GVYTATLTAG IMVGTSSITA SVNSTALGVT PATVTLNGDS GNLSTTNSTL VAAPVNIEAN SSDTSVVTLT LRDNNNNPVT GQTVVFTSTL GTLGNVTEQA SGVYTATLTA GTVSGVASLS VSVGGNALGV TPATVTLNGD SGNLSTTNST LVAAPVNIEA NSSDTSVVTL TLRDNNNNPV TGQTVNFAGT LGTLGTVSEG SSGVYTTTLT AGTVAGVASL SVNVGGNALG VTPATVTLNG NSGNLSATNS TLVAAPVNIE ANSSDTSVVT LTLRDNNNNP VTGQTVAFTS TLGTLGNVTE QASGVYTATL TAGTVSGVAS LSVSVNSNAL GVTPATVTLN GDSGNLSTTN STLVAAPVNI EANSSDTSVV TLTLRDNNNN PVTGQTVAFT STLGTLGNVT EQASGLYTAT LTAGTVSGVA SLSVNVGGNA LGVTPATVTL NGDSGNLSAT NSTLVAAPVN IEANSSDTSV VTLTLRDNNN NPVTGQTVAF TSTLGTLGNV TEQASGLYTA TLTAGTVSGV ASLSVNVGGT ALGVTPATVT LNGDSGNLST TNSTLVAAPV NIEANSSDTS VVTLTLRDNN NNPVTGQTVA FTSTLGTLGN VTEQASGLYT ATLTAGTVSG VASLSVSVNS TALGVTPATV TLNGDSGNLS TTNSTLVAAP VNIEANSSDT SVVTLTLRDN NNNPVTGQTV AFTSTLGTLG NVTEQASGVY TATLTAGTVA GVASLSVNVG GNALGVTPAT VTLNGDSGNL STTNSTLVAA PVNIEANSSD TSVVTLTLRD NNNNPVTGQT VAFTSTLGTL GNVTEQASGV YTATLTAGTV SGVASLSVSV GSSALGVTPA TVTLNGDSGN LSTTNSTLVA APVNIEANNS DTSVVTLTLR DNNNNPVTGQ TVAFTSTLGT LGNVTEQASG VYTATLTAGT VSGVASLSVS VNSNALGVTP ATVTLNGDSG NLSTTNSTLV AAPVNIEANS SDTSVVTLTL RDNNNNPVTG QTVVFTSTLG TLGNVTEQAS GLYTATLTAG TVSGVASLSV SVGGNALGVT GNITLAPGAL DAARSILAVN KPSINADDRI GSTITFTAQD AQGNAITGLD IAFMTDLENS QIMTLVDHND GTYTANINGT QTGIANIAVQ SSGATIAGLA ATMVTITPGA WNTTQATPVM TVALPITTCQ SSSGVYKRYY IGIVTHELYD NYGNEISGIL TYNLGAGRYT TVTSQNSSVS GSNGLTRRSN SPVSHFILTS DAYTSQAACY AERIANVNVT ITVTAITDDF KTSAVNKVFI LGTGSN
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