Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1294 |
Symbol | hisS |
ID | 6088988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1423906 |
End bp | 1425180 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641596362 |
Product | histidyl-tRNA synthetase |
Protein accession | YP_001720045 |
Protein GI | 170023540 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0124] Histidyl-tRNA synthetase |
TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCAAAGA ACATTCAAGC CATCCGTGGT ATGAACGATT ACCTGCCAGC CGATACGGCA ATATGGCAGC GTATCGAAAG CATCTTGAAG CAAGTGCTAA GCGGTTACGG TTACAGTGAA ATCCGTATGC CGATTGTAGA GCAGACCCCG TTATTCAAAC GCGCTATCGG TGAAGTGACC GATGTGGTTG AAAAAGAGAT GTACACCTTT GATGATCGCA ATGGCGAAAG TCTGACACTG CGCCCGGAAG GGACTGCAGG CTGTGTGCGC GCGGGTATTG AACATGGTCT GCTGTACAAT CAGGAACAGC GTCTGTGGTA CATCGGTCCG ATGTTCCGCT ATGAACGTCC GCAAAAAGGT CGTTATCGTC AGTTCCATCA GTTGGGGGCC GAAGTCTTTG GTCTGCCAGG GCCAGATATT GATGCCGAGC TGATTTTACT GACAGCCCGC TGGTGGCGTG CATTAGGTAT CTTTGAACAT GTGAAGTTGG AGCTGAACTC TATTGGTTCG TTGGCTGCCC GTGCTGACTA TCGAGAAGCG CTGGTGGCGT TCCTGGAGCA ACATGTTGAG GTATTGGACG AAGATTGTAA GCGCCGTATG TACAGCAATC CGTTGCGGGT GTTAGATTCC AAAAACCCTG ATGTTCAGCA GTTGCTTGAT GATGCGCCAA AACTGTCTGA TTATCTGGAT GAAGAGTCAA AACAACATTT TGCCGGGTTG TGTGAACTTT TAGATAAGGC CAGCATCCCA TATACCGTTA ATGAGCGTTT AGTTCGTGGT TTAGATTATT ACAACCGTAC GGTATTTGAG TGGGTAACGC ACAGCCTGGG CGCACAAGGC ACAGTCTGTG CGGGTGGGCG TTATGATGGG TTGGTCGAGC AACTCGGTGG TCGTGCAACA CCGGCCGTGG GTTTTGCGAT GGGCCTTGAG CGCTTGGTTC TGCTGGTGCA GGCTGTTAAT GCTGATTTCC AGGTGCCTGC GACAGTTGAT GCTTATGTTA TCTCCTCCGG TGAGGGGGCG CAAAGTGCTG CGATGCTACT TGCTGAGAGC CTACGTGATG CCTTACCAAC GCTAAAAATA ATGACCAATT ACGGTGGCGG TAATGTTAAG AAACAATTTA CACGCGCTGA TAAGTGGGGC GCTCGTGTCG CTTTAATGCT GGGTGAAAGC GAAGTGGCCG CGCAGCAAGT CGTTGTAAAA GATCTGCGAA ATGGTGAACA AGAAACGCTG GCGCAAGCGG ATGTTGCTGC GCGTCTGGCT TTGATGTTGG GTTAA
|
Protein sequence | MAKNIQAIRG MNDYLPADTA IWQRIESILK QVLSGYGYSE IRMPIVEQTP LFKRAIGEVT DVVEKEMYTF DDRNGESLTL RPEGTAGCVR AGIEHGLLYN QEQRLWYIGP MFRYERPQKG RYRQFHQLGA EVFGLPGPDI DAELILLTAR WWRALGIFEH VKLELNSIGS LAARADYREA LVAFLEQHVE VLDEDCKRRM YSNPLRVLDS KNPDVQQLLD DAPKLSDYLD EESKQHFAGL CELLDKASIP YTVNERLVRG LDYYNRTVFE WVTHSLGAQG TVCAGGRYDG LVEQLGGRAT PAVGFAMGLE RLVLLVQAVN ADFQVPATVD AYVISSGEGA QSAAMLLAES LRDALPTLKI MTNYGGGNVK KQFTRADKWG ARVALMLGES EVAAQQVVVK DLRNGEQETL AQADVAARLA LMLG
|
| |