| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1293 |
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| Symbol | ispG |
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| ID | 6088980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1422570 |
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| End bp | 1423697 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641596361 |
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| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
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| Protein accession | YP_001720044 |
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| Protein GI | 170023539 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
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| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATAACG GATCCCCTAT TATTCGGCGT AAATCGACCC GGATTTACGT CGGTAAAGTG
CCTATTGGTG ATGGCGCACC GATTGCTGTG CAATCAATGA CCAATACCAA AACCACGGAT
GTGGATGCCA CTGTTGCCCA AATTAAAGCA TTGGAACGTG TTGGTGTGGA TATCGTGCGG
GTCTCGATAC CGACAATGGA TGCAGCTGAA GCCTTTAAGT TGATCAAACA GCAGTCTACT
GTTCCGCTAG TCGCAGACAT TCATTTTGAT TACCGAATCG CCTTGAAAGT GGCTGAGTAT
GGTGTCGATT GTTTGCGGAT CAACCCCGGT AATATTGGTA ATGAATCACG TATTCGTGAA
GTTGTTGCCT GTGCACGTGA TTACAATATC CCTATTCGTA TTGGTATCAA TGGCGGCTCG
CTGGAAAAAG ATATTCAGGA GAAATATGGT GAACCTACAC CAGAAGCCCT GCTTGAATCC
GCGATGCGTC ATGTCGATAT CCTTGATCGT CTCAATTTCG ATCAGTTTAA AGTCAGTGTT
AAAGCCTCCG ATGTCTTCCT GGCCGTCAAT TCCTATCGTT TGCTAGCGAA ACAAATTAAT
AATCCTCTGC ATTTGGGGAT CACTGAAGCG GGTGGTGCGC GCAGTGGTTC GGTTAAATCT
GCGATTGGAT TAGGTTTGCT GTTATCGGAA GGGATTGGCG ATACTTTGCG GATCTCTTTG
GCCGCAGATC CAGTAGAAGA AGTGAAAGTA GGCTTCGATA TCCTTAAATC ACTGCGTATT
CGTGCGCGTG GGATTAATTT CATCGCTTGC CCAACCTGTT CTCGTCAAGA GTTTGATGTT
ATTGGGACGG TGAATGCCTT GGAACAACGG CTGGAAGACC TGATTACACC TATGGATGTT
TCTATCATCG GTTGTGTGGT TAATGGTCCG GGAGAAGCGT TGGTGTCGAC AATTGGTGTC
ACTGGTGCGC GTAACCACAG TGGTTTTTAC GAAGACGGGG TGCGTCAAAA AGAGCGCTTT
GATAACAAAG CCATGATTGA CCAATTGGAA GCAAAAATTC GTGCCAAAGC ATCAATTCTT
GATGCGAATA ACCGGATTGT TATCAACCAA TTGGATGATA ATAAATAG
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| Protein sequence | MHNGSPIIRR KSTRIYVGKV PIGDGAPIAV QSMTNTKTTD VDATVAQIKA LERVGVDIVR
VSIPTMDAAE AFKLIKQQST VPLVADIHFD YRIALKVAEY GVDCLRINPG NIGNESRIRE
VVACARDYNI PIRIGINGGS LEKDIQEKYG EPTPEALLES AMRHVDILDR LNFDQFKVSV
KASDVFLAVN SYRLLAKQIN NPLHLGITEA GGARSGSVKS AIGLGLLLSE GIGDTLRISL
AADPVEEVKV GFDILKSLRI RARGINFIAC PTCSRQEFDV IGTVNALEQR LEDLITPMDV
SIIGCVVNGP GEALVSTIGV TGARNHSGFY EDGVRQKERF DNKAMIDQLE AKIRAKASIL
DANNRIVINQ LDDNK
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