Gene YPK_1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1288 
Symbol 
ID6089422 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1415834 
End bp1418254 
Gene Length2421 bp 
Protein Length806 aa 
Translation table11 
GC content39% 
IMG OID641596356 
Productbeta and gamma crystallin 
Protein accessionYP_001720039 
Protein GI170023534 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGATATA ATCGTAACCA TATGCTAACG TTAATGTTCT CTTTATTAAT TTTTGATGCC 
TATGCAAATG AACCCAAAGT CTGTTTTTAT ATGGATGATG ACTATAATGG TGAGTCTCTC
TGCGCGGCTC AAGGGAACTC AGTTGCCAGT ATTCCGGATA AATGGAATGA TCGCATATCC
TCAATTTCCA TTCCCCACGG TTTAGTTGTC ACCGTCTATG AAGATGTCGA TTTTTTGGGC
GCTTCTCGGT CTTTTGAAGC CGATGTGGAT TTGGTTTCAG ATAAGGATTT GATATATTTA
AATGATAATA TAAGTGCATT TAAAATAAAA AAGGCAGTTT GTTTTTATGG CGAAAGTAAC
TTTACAGGTG ACTCGTTGTG CTTATCTGGT GGTGAGCAAT TTGACTTGTA TCGTGGTAAC
TATCCTGAAA GGAAGCAATC TCATTTGGTA AATCCCTTAA ATGATGAGGT ATATTCAATA
AAAATCCCTC CAGGAATGCA AACTACAGTC TATGAGGACG ATGATTATAA TGGTAAATAC
TTTGTTTTGA CAGAGGATTA CACACCTGAT GATTTGTTGA TAATAAGAAT GAACAATAAA
ATCAGTAGCA TGCGAGTTTC TCAAGATGAA GATTTCATTT GTGATCGTTT CTGTTCTATA
AAAAAATCAA TTAAATTTAA AATACAAAAA AGTTTTGGTT CCTATTGGAT TGACCCACGA
ATAAAATACA GAGATATATT GCTCGATTTT CAGTTATCTG ACACTGATGA TTATTCAATA
AAATTTTTTG ATGAGGGTCT TATAAAAGTT AAAAATTATA AATTATTTTT CTTTGATGGT
AATGAAAAAC ATGGTGAGGG TTTTTTGTTT AATTTAAGTG ACAAAAGTAG TAATTTGTCA
TTTTTATTGC GTTTTAACGG TGGTTTTTTT AAAATTCAAT TTGTTGAATC ATTAAATAAT
GAAATTGTTT ATTCTTCTAC TTTGATTGGA ACGTTATTTG ATGATGCTAA CTCAGATGTT
ATTTTTGATA TCAATAATGT AGATGCAAAT AGCCCAATCG TTATTGATAA AATGGTATTA
ACCGTTGGTA AGGAGCATAA CCGGGCTGAA CGTAGTACTC TGGGGCTAGC GACTTGTTGG
GCAATACCCA TACTGAGTAT TTATAACTAT ATTGTTCAGG GGCATTGCAA TCAGGCAGAT
AAGTTTGTCC ATAATGCTGC CGATTTTTTT GGTAGCCCGG CAGATAAGAT ATTACAAGTA
TTTGGTTCCT CTTTACCCTT ACCCCCAAAA AATAGCAATG AAACATTAGA TGACGAATCT
GCATTAATTA ATTTTATGTC TGATGTTAAA GGGACGTTAA CCTATATTAC GACCAATATG
GGCGAACACG CATTAACCGT ACCGGCAACG GCACTCGCGT GCAAAGCCTC AATGCGAGAG
AAAATCCTGC CTCATCTGCG TAACCGACGT GATCTTGCTC CAGGGTGTAT CGATTGGACT
TTGAGTATTT TAACCGATTT TACCTTGTTG TTTGGTGCCA GCATTGAGTA TTGGAATAGC
AAAAATTTTG GGCGAGTAAT AGAAAATATT GTTCGCGAAG GGGAGATCGG TTCTGCTGTG
GCAGATGTGG ACACCGCATC ACGTTTAATC GAGTCAGTTC AGGCCCATGT GGCTGAAGCG
ACAGAGGTTG CAGATATCAT TCATCTCAAA ACGGCATTCG ACTTTTCTCA ACTCAGTTAT
GTCAGTTATG TACGTCATAC CGAAGAAGAA GTGGTATCGC CACAAAGCGC GCAGGCGCTA
CCCTTAGGGC GTTATGAACT GGCACTGGTA GATTACCATT TTATCGAGAC GGTACCCAGA
ATTCGTCAGG ATGGCCGTTG GGTAGAACGT CCAGATCTGC ATTTTGATAT TGAAGTGATT
AGCGGGGTTC CCGAAGAAAC TGATGCGAGC CGGCAAGTGC TTTTGCCGAT TATCGAAGCG
TGGCAGCATA GCTATCGCCA ACAAGAATTA CTTTTTCACG CCTCGGATAT TCTTCCAGAA
AGTGGCCTGG CTCGATATGA AATTGAGCCG TTGTTAGAGG CTTCACGGCT GACCAGCGAA
GTTGCAATCA GTTGGTTAAG GACTAGCCGT GATGATTTTG TTTACGTCGT AGTCCGTTTG
GAGGGCGAGG TTATTAGCCT CACCATGGCA GTCGATATCA ATATTAATGA TGTGGGGGTT
GCCGGGTCAT TAACCAATCC AGATTATGTA ATAACACCTA ATGCAGAAGG GGCCGTCAGA
GGCGCGGGTA CGGCGGCGAT CCGAGCATTA GCTGACCACT TTAAACGCAA AGGGAAAATA
TCCTTGGTCT CTTCTGTTAT TAGTCAGCCA TCCGCGATTG TGAAGAAAAA AGTGGGTTTT
AGATTTATTG AAGAACTTTA A
 
Protein sequence
MRYNRNHMLT LMFSLLIFDA YANEPKVCFY MDDDYNGESL CAAQGNSVAS IPDKWNDRIS 
SISIPHGLVV TVYEDVDFLG ASRSFEADVD LVSDKDLIYL NDNISAFKIK KAVCFYGESN
FTGDSLCLSG GEQFDLYRGN YPERKQSHLV NPLNDEVYSI KIPPGMQTTV YEDDDYNGKY
FVLTEDYTPD DLLIIRMNNK ISSMRVSQDE DFICDRFCSI KKSIKFKIQK SFGSYWIDPR
IKYRDILLDF QLSDTDDYSI KFFDEGLIKV KNYKLFFFDG NEKHGEGFLF NLSDKSSNLS
FLLRFNGGFF KIQFVESLNN EIVYSSTLIG TLFDDANSDV IFDINNVDAN SPIVIDKMVL
TVGKEHNRAE RSTLGLATCW AIPILSIYNY IVQGHCNQAD KFVHNAADFF GSPADKILQV
FGSSLPLPPK NSNETLDDES ALINFMSDVK GTLTYITTNM GEHALTVPAT ALACKASMRE
KILPHLRNRR DLAPGCIDWT LSILTDFTLL FGASIEYWNS KNFGRVIENI VREGEIGSAV
ADVDTASRLI ESVQAHVAEA TEVADIIHLK TAFDFSQLSY VSYVRHTEEE VVSPQSAQAL
PLGRYELALV DYHFIETVPR IRQDGRWVER PDLHFDIEVI SGVPEETDAS RQVLLPIIEA
WQHSYRQQEL LFHASDILPE SGLARYEIEP LLEASRLTSE VAISWLRTSR DDFVYVVVRL
EGEVISLTMA VDININDVGV AGSLTNPDYV ITPNAEGAVR GAGTAAIRAL ADHFKRKGKI
SLVSSVISQP SAIVKKKVGF RFIEEL