Gene YPK_1280 details

Gene Information

• Locus tag: YPK_1280
• Symbol: hscA
• ID: 6091009
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1406833
• End bp: 1408749
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641596348
• Product: chaperone protein HscA
• Protein accession: YP_001720031
• Protein GI: 170023526
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR01991] Fe-S protein assembly chaperone HscA

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTTAT TACAAATTAG TGAGCCGGGT TTAACCGCGG CACCACACCA ACGTCGGCTG 
GCTGCGGGGA TCGATTTAGG TACCACCAAT TCATTGGTGG CGACCGTGCG CAGCGGTAAA 
GCGCAGACGC TGGCCGATGA ACAGTTAGCC GATGAACAGT TAATAGCAGG TGAACAGCTA 
ATAGCAGGTC AACAGCTAAT AAATAAAAAA CAGCGGGATT TACTGCCGTC AGTGGTTCAT 
TATCACCCAC AGGGTATTGA TGTTGGTTGG AAGGCGCGCA ATTTGGCGGC CTTGGACCCG 
GTTAATACCA TCAGTTCAGT GAAACGCATG ATGGGCCGCT CTCTGGCTGA TATCGTACAG 
CGTTATCCCA ATTTACCTTA CCAATTCCAC GCGAGTGAAA ACGGTTTACC GATGATCCAG 
ACGGCGCGTG GGTTGGTGAA TCCGGTTCAG GTGTCGGCAG AGATCCTCAA AACACTGGCT 
CAGCGGGCGC AAGCGGCATT GGCCGGCGAG CTCGATGGCG TTGTCATTAC CGTTCCTGCG 
TATTTCGATG ATGCTCAGCG TCAGGGGACA AAAGACGCTG CGCGTTTGGC GGGGCTACAT 
GTCTTACGTT TACTGAATGA ACCCACTGCG GCAGCCATCG CCTATGGCCT GGATTCCGGT 
CAGGAAGGGG TGATTGCGGT TTATGATCTG GGGGGCGGGA CGTTTGATAT CTCCATTCTG 
CGTTTAAGCC GTGGCGTATT TGAAGTGCTG GCAACCGGTG GTGACTCGGC GCTGGGTGGC 
GATGATTTTG ATCACCTCTT GGCTGACTGG TTACGTGAGC AAGCCGGGGT TGCGACCCGC 
GATGACCACG GCATTCAACG GCAGTTACTT GATACGGCAA TTGCCGCCAA AATTGCCTTG 
AGTGAGGCCG AGACTGCGGT AGTTTCCGTG GCTGGCTGGC AAGGGGAGGT TACTCGTGAG 
CAGCTTGAGT CGCTCATTGC TCCGCTGGTA AAACGCACAC TGATGGCTTG CCGCCGCGCC 
TTGAAAGATG CGGGCGTCAC GGCTGATGAA ATTTTGGAAG TGGTGATGGT CGGTGGTTCG 
ACCCGAGTCC CGTTGGTGCG AGAGCAGGTG GGGCAATTCT TTGGCCGCAC GCCGTTGACC 
TCTATCGATC CCGATAAAGT GGTCGCCATT GGTGCCGCTA TTCAGGCTGA TATTCTGGTG 
GGCAATAAAC CGGACAGTGA CATGTTGCTG CTTGATGTGA TCCCGCTCTC CTTAGGGCTG 
GAAACGATGG GCGGTTTGGT GGAGAAAGTG ATCCCCCGCA ATACCACCAT TCCGGCGGCT 
CGAGCGCAGG AGTTCACCAC CTTCAAAGAC GGTCAGAGTG CGATGATGAT CCACGTGCTG 
CAAGGCGAGC GTGAATTGGT GAAGGATTGC CGTTCATTAG CCCGTTTTAC GTTGCGTGGC 
TTGCCTCCTT TGCCTGCGGG AGGGGCACAT ATTCGTGTCA CTTTCCAGGT GGATGCTGAC 
GGCTTATTAA GTGTGACGGC GATGGAGAAA TCGACGGGCG TTGAGGCATC GATTCAGGTG 
AAGCCATCTT ATGGGCTGTC TGATGATGAA ATTGCCAATA TGATTAAAGA TTCCATGGCG 
AATGCGCAAA GTGATATCAC CGCCCGTAAA CTGGCGGAAC AACAGGTTGA TGCCGCCAGA 
GTGCTAGAGA GCCTGCAAGG CGCACTGGCA GAAGACGCCG CGTTACTCAG TGAGCAAGAA 
AGTGCCGCGA TCGCCCAAGC GGTCGCGTTA TTACAGCAGC AGATGCAGGG CAGCGACCCA 
CAAGCCATCG AAGCTGCGAT CAAAGCGTTA GATGCACAAA CGCAAGATTT TGCCGCACGC 
CGGATGGACG CTTCCATTCG CCGTGCTTTA GCAGGTCATT CAGTGGATGA GGTTTAA 

 

Protein sequence

MALLQISEPG LTAAPHQRRL AAGIDLGTTN SLVATVRSGK AQTLADEQLA DEQLIAGEQL 
IAGQQLINKK QRDLLPSVVH YHPQGIDVGW KARNLAALDP VNTISSVKRM MGRSLADIVQ 
RYPNLPYQFH ASENGLPMIQ TARGLVNPVQ VSAEILKTLA QRAQAALAGE LDGVVITVPA 
YFDDAQRQGT KDAARLAGLH VLRLLNEPTA AAIAYGLDSG QEGVIAVYDL GGGTFDISIL 
RLSRGVFEVL ATGGDSALGG DDFDHLLADW LREQAGVATR DDHGIQRQLL DTAIAAKIAL 
SEAETAVVSV AGWQGEVTRE QLESLIAPLV KRTLMACRRA LKDAGVTADE ILEVVMVGGS 
TRVPLVREQV GQFFGRTPLT SIDPDKVVAI GAAIQADILV GNKPDSDMLL LDVIPLSLGL 
ETMGGLVEKV IPRNTTIPAA RAQEFTTFKD GQSAMMIHVL QGERELVKDC RSLARFTLRG 
LPPLPAGGAH IRVTFQVDAD GLLSVTAMEK STGVEASIQV KPSYGLSDDE IANMIKDSMA 
NAQSDITARK LAEQQVDAAR VLESLQGALA EDAALLSEQE SAAIAQAVAL LQQQMQGSDP 
QAIEAAIKAL DAQTQDFAAR RMDASIRRAL AGHSVDEV