Gene YPK_1243 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1243 
Symbol 
ID6091099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1367390 
End bp1369201 
Gene Length1812 bp 
Protein Length603 aa 
Translation table11 
GC content40% 
IMG OID641596311 
Producthypothetical protein 
Protein accessionYP_001719994 
Protein GI170023489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAACGC AAATACCTGA AATAAATAGC AGCATGAATT TATTACGTAA CATCATTTGG 
CAATATGACG GTAGCGAAGA AATACAAACG TTAATGCAGA AAAAGGAAGA ATGGTACAAC
AAAGCGCATA CCGAATTTTG GAATAACTGG TTCACTGATG TTTTTGATTT ACGTACAGCG
AATGATTTTG GCTTAAGTGT ATGGGCTTTA ATTCTTGGCG TTAATTTATT TATTCCTGAA
TGCCCCAACG TGGTTTTAAC CACTGAACAA AAACGCCTGG TATGCAGACT GCGTTATTAT
CAATTAATTA CACGTTGCAC CATTCCCGAA GTTAACGCGA TCATGATGGA TATGTTCGCG
ACTGAGAACG GCAAAGCTTA CGCGCTCGAT CCTAACGATA TGTCGTCAAT CATGTATGTA
TTCACTGAAC AGCCAGCCAG CGCTGTAGCG TTGATACTGA CCAAATATGA CTTATTACCG
CGTCCTGCAA CCGTGGGCCT AAAGTTTCGT GTTATTCGCT ATATTCCCTT TGGTTTCGGT
CAATACTATC AAAACTTTGA ACATGCCGGG TTTTGGGATG GCGGCGAACT GATTAATTAC
GGATGGCGCA TTAACTTATT TTTTGACAAT GATAGCGGCG TACTGCACGG GCAAATAGCA
TCATCTGACA GTACGATAGA TTTATCGAGC ATTGACGTCA CGCTGTACTA CACAAAATCA
ACGGGTGAGA CATTTACACG TGAAGTCACG ACGACTGATG ACGGGCTATT TACGGACCTT
GTGAGTCGCT CAGGGGCTTA CTCTGTCATT GCAAAGACAC AGATATTTAC GCCGATCTGC
ACAGTAGATA ATGTTGAATC AAGAAGCTAC GCGTTCACGT ACTTAATCAG CGGTGCTGAT
GTGATGCTTA AGATTTACAA CCCTGAAGCG CCGTTATTTA AATTAAACGA CATTGGGGAA
GTAATCACGA TTGATTACGG CGATGGTGTA GACAGTGATG ATTATCGTGT TGATAGCCAG
GGATTGGTTT ATGCAACTCG CGCGTTGACT GCAGGGATTA CGTATAGAAT AAACGTAAAG
CGTAGTAATA GCTGTGTGTT TTATCATTCA TCATTGGCGT TTGAAAATAA AGTAATAGAA
GTCATTAGCG TGTCTGGCAG CAGGCAGAGT ATGGCTAACT CATTTACAGC TTGCACTGAG
TTACAAGTAA TACAGGCTGG GGCATTCGAT TATTTGCCAA ATGTCACTAC GTTTAGTTTT
GCGTTTAATG ACTGCTTATC GCTGCAATTG ATACCTGATA ATTTATTTAA ATATTGTACG
CGCGTTGTTA ACTTTAGTTA TGTATTCTTA TCTTGTTGGA GTTTGCAATA TATACCCACA
GGATTGTTTG ACTACAACCC ATTAGTGACA ACATTTCAGT TTGCATTTAG ATTCTGTACG
TCTCTTAAAG AAATTCCGGC AGGTTTGTTT GATAACAATA CGTTCGTTAC ATCATTTAAA
ATCGCGTTCG GAAATTGCTC AAAAATATTA AGTGCGCCAA CTGGGTTATT CGATAATGCA
CCGAATGCGA CAATTTTTGA AAACGTATTT GTGGATTGTT TGCTTATGAC TTCTGACATC
AATGATATCT TCCCGCTTGC TGAATATAAC GCAATTAAAG ATTTGTGGTG GGCGTTTAAC
AATTGCCGGT TATTACGCGG CAGTGCGCTT ACGTTTATAG ATAAAGTGCC GAATGTAACA
ATCAAGACAA AGACATTTAC GAATGCGTCT AGTTTGTCGG ATTACAATCA AATACCCGCA
GCTTGGAGGT AA
 
Protein sequence
MSTQIPEINS SMNLLRNIIW QYDGSEEIQT LMQKKEEWYN KAHTEFWNNW FTDVFDLRTA 
NDFGLSVWAL ILGVNLFIPE CPNVVLTTEQ KRLVCRLRYY QLITRCTIPE VNAIMMDMFA
TENGKAYALD PNDMSSIMYV FTEQPASAVA LILTKYDLLP RPATVGLKFR VIRYIPFGFG
QYYQNFEHAG FWDGGELINY GWRINLFFDN DSGVLHGQIA SSDSTIDLSS IDVTLYYTKS
TGETFTREVT TTDDGLFTDL VSRSGAYSVI AKTQIFTPIC TVDNVESRSY AFTYLISGAD
VMLKIYNPEA PLFKLNDIGE VITIDYGDGV DSDDYRVDSQ GLVYATRALT AGITYRINVK
RSNSCVFYHS SLAFENKVIE VISVSGSRQS MANSFTACTE LQVIQAGAFD YLPNVTTFSF
AFNDCLSLQL IPDNLFKYCT RVVNFSYVFL SCWSLQYIPT GLFDYNPLVT TFQFAFRFCT
SLKEIPAGLF DNNTFVTSFK IAFGNCSKIL SAPTGLFDNA PNATIFENVF VDCLLMTSDI
NDIFPLAEYN AIKDLWWAFN NCRLLRGSAL TFIDKVPNVT IKTKTFTNAS SLSDYNQIPA
AWR