Gene YPK_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1236 
Symbol 
ID6090376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1361899 
End bp1363470 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content47% 
IMG OID641596304 
Producthypothetical protein 
Protein accessionYP_001719987 
Protein GI170023482 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTGC TCGAGGCGTT TTACTACACG TTTGCAGCAG ACGCTTCAGG GCTTGATCGT 
GGGCTGACTG ATGCAGAAAA AAAGGCCGAG AAATTAAAAA ACTCGGTATC AAGTGCCGAT
GCCGCGTCTG AAAAATTGGG CGCGTCATTT TTAAGCCTGG CGAAAGCTGG CGTCGCATTG
CTGGGCGTCA CATTAACACT CGGCGGCATT AAAGCGCTGG CGTTAGGGAC AGCAGAAACA
ACAAGTGAGC TAGGAAAACA GGCCCGGCAA ATGAACGTCA ACGTATCGAC GTTGGACGCG
TGGCGCAAGA CCATCACAGA AAGCGGCGGC GATGCTGAAG CCTTCACGCG CACGCTCGGC
AATATGGCCC AGCGGTTCCG TGATCCGGAG GCCGCATTAT TGCGCTACAG CAAGGCGCTG
GGGGGCATGA GCGCATTTCG GGCGCAGCGG CTGGGGAAAA TGATTGGCCT GGACGAAGGA
ACAATAGAAT TACTGCGCAA AGGAAAAATG AGTGTAGAGG AATTACTTAA AAAGCAGAAA
GAGCAGGGGG TAATAACAAA AGAGCAGGTC GCAATGACGG ATAAATTCAA TCAAGATTTG
CGAACACTTA AAATGAGTTT TACTGATTTA AAAACTAATA TCGGAATGGG ATTAATTCCA
ACATTTCAAT ATTTGCTCGA TAAGTGGAAC GCATTATCAA AATGGACATC TGAAAATAAA
GATTTCGTGA AGGGATTCTT TATTGCTATT GCAGCTATCA TTGTCGATTT CTATTTACCC
GCAATGTTAA AAGCCGCAGC AGCAACGATA GCCGCAACGT GGCCTATTTT ATTAATCGTT
GCCGCCGTTG TTGCCGTTGC CGCTGCGTTC GCTTTGGCTT ATGACGACGT CATGAATTTT
CTTGCGGGAA ATGATTCAGT TATCGGTGAG CTATCAAAAA AATGGCCGTG GATCGGTGAA
TTGGTGCTGG GCTTAGTCGC TGAATTGAAA AATCTCTGGG CGCAAATTGT TGCGGTTGGA
GATGCGTTTA TTTTAATGGT AACTAATCCT ATTCAGTTTT TAAAAAACTT CGGCGCTGAA
ATTAGAGAAT TACTGGATCT GCTATTCGGT GAGGGAGCTG GAGATAGTAT TTTTAGCGCA
ATCGCTGATT CAGTCGGCGC GGCGTGGAAG GGGATAAAGA TATTAATTAC AAGTGTTGTC
GGCTTAGCAA TGAAAGGGTT TGAAGCTATA GGTAACGCGT GGAAAAAAGT AAAAGGCTGG
TTCGGCGCGG GCGAAGAAGA AGTTAATAAC GCAAAAAACG CGGCAGCAGG GCAATCACTG
CAGGGCTGGG AGACTCCGGG GGACTTAACT TACGGCGGCA AGGAGCAACT GGCGCAGGCA
TCAGCAAGCA GCGTAACGAC AATGACGAGC AGCAGCATTA CTAACAGCAA AGCAGCGAAT
AAAAATATTA ATAATCGCGT CGATAAAATA GAAGTGATCA CGCAGGCGAC GGACGCGGAG
GGGATCGCCC GTGACATCGG CAGTGAATAT GGCAATGCAA TGAGTCAGTA CGCTGACGGG
TTGGAAATAT AA
 
Protein sequence
MNLLEAFYYT FAADASGLDR GLTDAEKKAE KLKNSVSSAD AASEKLGASF LSLAKAGVAL 
LGVTLTLGGI KALALGTAET TSELGKQARQ MNVNVSTLDA WRKTITESGG DAEAFTRTLG
NMAQRFRDPE AALLRYSKAL GGMSAFRAQR LGKMIGLDEG TIELLRKGKM SVEELLKKQK
EQGVITKEQV AMTDKFNQDL RTLKMSFTDL KTNIGMGLIP TFQYLLDKWN ALSKWTSENK
DFVKGFFIAI AAIIVDFYLP AMLKAAAATI AATWPILLIV AAVVAVAAAF ALAYDDVMNF
LAGNDSVIGE LSKKWPWIGE LVLGLVAELK NLWAQIVAVG DAFILMVTNP IQFLKNFGAE
IRELLDLLFG EGAGDSIFSA IADSVGAAWK GIKILITSVV GLAMKGFEAI GNAWKKVKGW
FGAGEEEVNN AKNAAAGQSL QGWETPGDLT YGGKEQLAQA SASSVTTMTS SSITNSKAAN
KNINNRVDKI EVITQATDAE GIARDIGSEY GNAMSQYADG LEI