Gene YPK_1223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1223 
Symbol 
ID6091178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1351947 
End bp1353485 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content51% 
IMG OID641596291 
Producthypothetical protein 
Protein accessionYP_001719974 
Protein GI170023469 
COG category[S] Function unknown 
COG ID[COG3567] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01555] phage-related protein, HI1409 family 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGATGGT TTAAACGTAA GAAAAAAGAG GAACAACAAA AGCCAGAGCG AGTGCGTGAA 
GGGTTCTTTA GTACTCATCG CGAGTCAGAC GATAGCGCGA CGGCAACCGA GGCGCTACAG
GGGAAGATAA GCCACATTGC CAGCACTCAG CCGGTGGCCA AGATAGTTGG CACGATGGAC
AGCACGGACG GCGGCAGGGC GTTACAGTCC ACTCACGTAA GCGGCGGCGG TACGGTCAGT
GACAGCCTGT TTATGTGGTA TGCGAACAGT AATTTTATCG GCCACACGAT GTGCGCCATC
ATTGCGCAAC ATTGGCTGAT TTATAAAGCT TGCGCCATGC CGGGCCGTGA TGCGATTAGG
CAGGGCTATA CGATTCAGGG TGAGGGCGGC GAAGAGTTAG ATCCTGAGGC GCTAAAGCTA
CTAAAGCGCT ACGACAAAAA AATGAATATC AATAAACAGA TGCGCGATTT CGTCACCTTC
GGCCGTATCT TCGGGGTTCG TGTCGCCCTG TTTCGCGTTG AGAGTGACGA CGACGAATAT
TATCAAAACC CGTTTAACGA AGATGGCGTA ACGGAGAATA GCTACAAGGG CGTGGTACAG
ATTGACCCTC AGTGGTGTAC GCCTGATTTA GACGCGGAAG GATTAACCGA CCCGACGTCG
CCTGATTTTT ACAATCCAAC CCACTGGTTG ATTAACGGCA AAAGATATCA TCGTTCGCAC
CTGATGATAT TTATTCCTAA TCCCGTCGCC AACATTTTAA AGCCTGGCTA TCTGTTCGGC
GGCGTACCTG TACCGCAAAA GATAATGGAG CGCGTCTACG CATCAGAACG TACAGCTAAC
GAAGCTCCAC AACTGGCACT TAGCAAGCGA ACCACGATAT TTAAAACCGA TGCAGCAAAA
GCATTATCAA ACGAAAGTGC GTTCAATCAG AACATGGCCA CCTGGATTAA ATACCGCGAC
AATTACGGCG TGAAAATTGT TGATAACGAA GAAGATAGCT TAGAGCAGTT TGATACTTCA
CTTGCCGACT TTGACGCGCT GATCATGACG CAGTATCAGC TTGTCGCGGC AGGTGCTGAT
GTCCCGGCGA CCAAGCTACT CGAAACCCAG CCTAAAGGGT GGGCTAGCTC GGGCGAGTAC
GAAGAGGCCA GCTATCGAGA GGGACTGGAA AGCCTACAGA CCCACGACTT AACCCCGCTA
CTGGAGCGAC ATCACTTACT ACTGATGCGC TCACACGTTG CGCCTGAACT CAATATTAAG
CCTGTTGAAA CTTGTGTTAA TTGGGAGTCG CTCGACTCAC CGACCGCCAA AGAATACGCA
GAGATTAACG AAATCAACAG CCGTGCAGAT TTGAACCTAG TGAATTCCGG CGCGCTCGAT
CAATACGATG TCCGCGACCG GCTCATAGCC GATAAAAACA GCGGGTATAG CGGTATAGCG
CCAGCAGAGC CACCGACAGA GGGGGATCTA CCGACACCGA CAGAGGGAGG GGGTAATGGC
GAAAACACCG AAAAAAATGG CGAGACGCCA ACCGCCTAA
 
Protein sequence
MGWFKRKKKE EQQKPERVRE GFFSTHRESD DSATATEALQ GKISHIASTQ PVAKIVGTMD 
STDGGRALQS THVSGGGTVS DSLFMWYANS NFIGHTMCAI IAQHWLIYKA CAMPGRDAIR
QGYTIQGEGG EELDPEALKL LKRYDKKMNI NKQMRDFVTF GRIFGVRVAL FRVESDDDEY
YQNPFNEDGV TENSYKGVVQ IDPQWCTPDL DAEGLTDPTS PDFYNPTHWL INGKRYHRSH
LMIFIPNPVA NILKPGYLFG GVPVPQKIME RVYASERTAN EAPQLALSKR TTIFKTDAAK
ALSNESAFNQ NMATWIKYRD NYGVKIVDNE EDSLEQFDTS LADFDALIMT QYQLVAAGAD
VPATKLLETQ PKGWASSGEY EEASYREGLE SLQTHDLTPL LERHHLLLMR SHVAPELNIK
PVETCVNWES LDSPTAKEYA EINEINSRAD LNLVNSGALD QYDVRDRLIA DKNSGYSGIA
PAEPPTEGDL PTPTEGGGNG ENTEKNGETP TA