Gene YPK_1220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1220 
Symbol 
ID6090503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1348700 
End bp1349251 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content44% 
IMG OID641596288 
Productterminase small subunit 
Protein accessionYP_001719971 
Protein GI170023466 
COG category[L] Replication, recombination and repair 
COG ID[COG3728] Phage terminase, small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGC TCAAAGCAAA ACCTGAGCTG TTTTGCCGTG AGTATATTGT CGATTTGAAC 
GTCACGCAGG CAGCTATACG AGCGGGTTAC AGCGCCAAAA CCGCATATAG CAGCGGCCAA
CGTCTCTTTA AAGAAGAGGT GGTACAACAA CGCATTAATG AACTTAAGCA CGATCGAATT
AATCAATTGG GGGTTGATGC TAATTACGTC CTGCTACGAC TCGTAGAAAT CGACCAAATG
GACGCGGCGG ATATATTTAA TAAAGACATG AGTATCAAAC CTATTCGTGA ATGGCCGCAA
GTTTGGCGAC GTTATATCAG TGGTTTCGAC GTATCCGAAC TGTTTGAAGG TAAAGAAATG
GTCGGGATCC TAAAGAAAAT TAAATGGCCT GACAAAGTTC GTAACCTTGA ATTGCTCGGC
AAGCACATTG CTGTTCAGGC TTTTAAAGAA AATATTAGAA ATGAAGTTAC CGGCGCGAAC
GGGGGGCCGA TGCAGATATC AAACCTATCC CCGGATGAAG CTGCAGAGGC CTACCGTAAA
ATGATGGAAT AA
 
Protein sequence
MAKLKAKPEL FCREYIVDLN VTQAAIRAGY SAKTAYSSGQ RLFKEEVVQQ RINELKHDRI 
NQLGVDANYV LLRLVEIDQM DAADIFNKDM SIKPIREWPQ VWRRYISGFD VSELFEGKEM
VGILKKIKWP DKVRNLELLG KHIAVQAFKE NIRNEVTGAN GGPMQISNLS PDEAAEAYRK
MME