Gene YPK_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1198 
Symbol 
ID6089463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1333013 
End bp1333840 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content49% 
IMG OID641596266 
Productputative DNA-binding protein (Roi) 
Protein accessionYP_001719949 
Protein GI170023444 
COG category[S] Function unknown 
COG ID[COG3646] Uncharacterized phage-encoded protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATAA AGATGGAGGG TCTTGAAATG AAAAACGCGT CGGTAGCAGC AACTACCGAC 
GCGTCTAAAA AACCTAACGG AGATACAACA ATGAATACTT TAGCACTGGC AAACAGTACT
AAGCAAATTG CAATGACCCA CAAAGAGATC GCGGACTTGG TTAACAAGCG CCCAGACAAC
GTGAAACGAA CCATAGAAAC ACTGGCGGAA AGCGGCGTCA TCCAGCTTCC TCAAATTGAG
GTTTGTGGGA GAATCAACGG GTTAGGTAAA GAACAAAAAG AAAGCGTATA CCTTTTCAAG
GGTGAACAAG GCCGGCGAGA TAGCATTGTT GTGGTTGCTC AGCTCTGCCC CGAGTTTACC
GCTCGTCTTG TTGACCGCTG GCAACAGCTA GAATCACAGG TATCCTCTCC GTTCATTGAC
CCTATGACCG CACTCAACGA TCCCGCTACT ATGCGTGGTC TGCTGCTTGG GTACACCGAG
AAAGTCCTTA CCCTGCAAAA TCAAGTGCAG GAAATGAAAC CTGACGTTGA CGCGCTACAC
CGTATTGCCA AATCTGATGG CGGTACCTGC ATATCCACCG CAGCCAAGGA TCTGCAAATC
CGCCCTAAAG ACCTCTTCAC TTACCTGAGT GCCAATGGCT GGATCTATCG CCGAGTCGGT
GGCAAAAGTT GGCTAGCCTA CCAAAGTAAG ATCCAGGCTA GTCTACTGGA GCATAAAGTT
ACGGTAATCA CACGTGGAGA TGGCTCCGAG AAAACTGTCG AGCAGGTTCT TGTGACTCCG
AAGGGACTGA CCAGGCTATC CCAGCTAATG AACCAGCAGG CTGCATAA
 
Protein sequence
MRIKMEGLEM KNASVAATTD ASKKPNGDTT MNTLALANST KQIAMTHKEI ADLVNKRPDN 
VKRTIETLAE SGVIQLPQIE VCGRINGLGK EQKESVYLFK GEQGRRDSIV VVAQLCPEFT
ARLVDRWQQL ESQVSSPFID PMTALNDPAT MRGLLLGYTE KVLTLQNQVQ EMKPDVDALH
RIAKSDGGTC ISTAAKDLQI RPKDLFTYLS ANGWIYRRVG GKSWLAYQSK IQASLLEHKV
TVITRGDGSE KTVEQVLVTP KGLTRLSQLM NQQAA