| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1182 |
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| Symbol | |
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| ID | 6090549 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1318594 |
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| End bp | 1319169 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641596250 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_001719933 |
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| Protein GI | 170023428 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0314169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCGAGC AGTTAACGGA TCAGATGCTG GTTGAACGGG TCCAGAAAGG CGATCAACAA
TCGTTCAATT TACTGGTCAT TCGCTACCAG CATAAAGTTG CGAGCCTCGT ATCCCGGTAT
GTGCCTCAGG GCGATGTCCC TGATGTTGTT CAGGAATCTT TTATTAAAGC GTATCGCGCA
CTGGAGTCAT TTCGTGGTGA TAGCGCTTTT TATACGTGGC TATATCGGAT TGCTGTAAAT
ACAGCGAAAA ATTACTTAGT CGCTCAGGGG CGGCGCCCGC CATCCAGTGA TGTGGATGCG
AATGATGCTG AAAATTATGA AAATGCGGGT GCATTGAAAG AAATATCGAA CCCTGAGAAC
TTAATGTTGT CTGAAGAATT AAGGCAGATA GTTTTTAAAA CCATAGAGTC ACTTCCTGAA
GATCTTCGAA TGGCGATCAC ATTAAGGGAG CTAGATGGTC TAAGCTATGA AGAGATAGCA
GCCATTATGG ACTGTCCGGT GGGTACTGTT CGTTCACGTA TCTTCCGTGC CAGAGAAGCT
ATTGATAACA AAGTTCAGCC GCTAATTCAG CGATAG
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| Protein sequence | MSEQLTDQML VERVQKGDQQ SFNLLVIRYQ HKVASLVSRY VPQGDVPDVV QESFIKAYRA
LESFRGDSAF YTWLYRIAVN TAKNYLVAQG RRPPSSDVDA NDAENYENAG ALKEISNPEN
LMLSEELRQI VFKTIESLPE DLRMAITLRE LDGLSYEEIA AIMDCPVGTV RSRIFRAREA
IDNKVQPLIQ R
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