Gene YPK_1180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1180 
Symbol 
ID6090581 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1315728 
End bp1316486 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content49% 
IMG OID641596248 
Productmethyltransferase small 
Protein accessionYP_001719931 
Protein GI170023426 
COG category[R] General function prediction only 
COG ID[COG4123] Predicted O-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTGACTA ATGTGGGCGA ACAATTAAAA AAACAACCGG TATTACGTGG TGGCGGTTTC 
ACCTTTAAAC AATTCTTTGT GGCACATGAT CGCTGTGCAA TGAAAGTGGG CACTGACGGC
GTTCTGCTGG GGGCTTGGGT GCCGGTGTTA CACGCCCGTA GAGTTTTGGA TATTGGCTGT
GGCAGTGGGC TTATCGCCTT AATGATTGCC CAACGTTCAT TGCCACAGGT GCAGATTGAC
GGGGTTGAAC TGGAACCCGC CGCTGCGCAA CAGGCGAGCA GTAATGTTGA GTTATCTCCT
TGGGCTGAAC GCATTCATAT CCATCAGCAA GATATTCATC AGTTTGCTGA GAATCATCCT
CATCAGTATG ACCTGATTGT CAGTAACCCG CCTTACTTTG CTCCGGCCAT TGCTTGTCGG
GATGAAGCCC GTGATACCGC GCGCTATACC GGGTCACTCA CGCATGATAC TCTACTGAAC
TGTGCGGAGA AGCTTATCAC AGAGGACGGG ATGTTTTGTG TGGTTTTACC CCATGAGTTA
GGAATTGAAT TTGCCCGCCT TGCTGGGCAA CAGGGCTGGT TTGTCCGGTG CCAGGTTGAT
ATCAGGGATC GCCCCGGTAA ACCGTTACAT CGAATGCTAC TGACACTTTC AAGACAAGCG
GGTGAGACGG TGTATCAACA TTTAGCTCTG CGTCAGTCTG AAGGTGTTTA CTCACCTGAG
TTTTGCCAGC TCATCAGTGA TTTCTATCTA AACTATTAA
 
Protein sequence
MVTNVGEQLK KQPVLRGGGF TFKQFFVAHD RCAMKVGTDG VLLGAWVPVL HARRVLDIGC 
GSGLIALMIA QRSLPQVQID GVELEPAAAQ QASSNVELSP WAERIHIHQQ DIHQFAENHP
HQYDLIVSNP PYFAPAIACR DEARDTARYT GSLTHDTLLN CAEKLITEDG MFCVVLPHEL
GIEFARLAGQ QGWFVRCQVD IRDRPGKPLH RMLLTLSRQA GETVYQHLAL RQSEGVYSPE
FCQLISDFYL NY