| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1172 |
|---|
| Symbol | |
|---|
| ID | 6090670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1309998 |
|---|
| End bp | 1310645 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641596240 |
|---|
| Product | pyrrolidone-carboxylate peptidase |
|---|
| Protein accession | YP_001719923 |
|---|
| Protein GI | 170023418 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
|---|
| TIGRFAM ID | [TIGR00504] pyroglutamyl-peptidase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0112085 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGTG TATTAATTAC CGGGTTCGAA CCTTTTGGGG GGGAGCGGAT CAATCCTTCC
TGGGAAGTGG TCAAACAAAT GAATGATTTA ATGATGGGTG GCGTCAGAAT TGTGGCGCGC
CAGCTACCCT GCGCATTCGG TGAGGCACTG ACCGCCCTGA ACACCGCGAT AGATGATGTC
CAGCCCGTAT TGGTACTTGC TATCGGTCAG GCGGGAGGCC GTGCGGACAT TACCATTGAA
CGGGTGGCGA TTAACGTTGA TGACGCGCGT ATCCCAGACA ATTTGGGTAA TCAGCCCGTT
GATCAGCCTA TTATTCAAGA GGGACCTGCG GCATATTTCA CCCGCCTACC GATCAAAGCC
ATGGTTCAGG GGATACGAGA AGCGGGGATA CCGGCATCAG TTTCTCAAAC TGCGGGTACC
TATGTGTGTA ACCATGTTAT GTATGGTTTA TTGCATCGGT TAAATCAGTT TAATAATGAG
GTCAAGGGCG GTTTTATTCA TATCCCTTAT TTGCCAGAAC AGGCAGTTGA TCACCCCGGT
GCGCCCAGTA TGTCGGCACA CTCAGTGTTG GTCGCGTTAG AATTGGCTAT CTCTATCGCA
TTGCAGATTG AGCATGATTT GCATATCACG GGGGGAGCAG TTCACTGA
|
|---|
| Protein sequence | MRRVLITGFE PFGGERINPS WEVVKQMNDL MMGGVRIVAR QLPCAFGEAL TALNTAIDDV
QPVLVLAIGQ AGGRADITIE RVAINVDDAR IPDNLGNQPV DQPIIQEGPA AYFTRLPIKA
MVQGIREAGI PASVSQTAGT YVCNHVMYGL LHRLNQFNNE VKGGFIHIPY LPEQAVDHPG
APSMSAHSVL VALELAISIA LQIEHDLHIT GGAVH
|
|---|
| |