Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1169 |
Symbol | |
ID | 6090957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1307419 |
End bp | 1308156 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641596237 |
Product | LamB/YcsF family protein |
Protein accession | YP_001719920 |
Protein GI | 170023415 |
COG category | [R] General function prediction only |
COG ID | [COG1540] Uncharacterized proteins, homologs of lactam utilization protein B |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000136688 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAATTG ATTTAAATGC TGATTTGGGT GAGGGCTGCG CCAATGATCA GGCGCTGCTG CAATTGGTCA GTTCGGCCAA CATAGCCTGC GGTTTTCATG CAGGTGATGC GCAAACTATG CGTCAATCGG TACGCTGGGC GTTGGAGTAT GGTGTGGCTA TTGGTGCACA TCCGAGCTTC CCGGATCGGG AAAACTTTGG TCGCACTGCT ATGCAGCTAC CACCTGAGAC CGTCTATGCT CAAGTGGTTT ATCAATTGGG CGCGCTTGCC GCCATCGTGC AGGTTGAAGG GGGGGTTATG CAGCACGTAA AACCCCATGG CATGTTGTAT AACCAAGCGG CGGTCGATCC GTTATTGGCG GATGCCATTG CTCAGGCGGT TAAGGCTGTG GATCCGTCAT TACGTCTGGT CGGGTTAGCC GGGAGTGAGT TGATCCGCGC CGGTACCCGT GTGGGGTTAG TCACCCGGCA GGAAGTGTTT GCTGATCGCC ACTATCAACC CGATGGCACG TTAGTTCCTC GCAGTCAGCC AGATGCTCTA ATAGAAAGTG ACGAGTTAGC GCTGTCACAA ACTCTGGCTA TGGTGCAACA GCATCAGGTT CAGGCCTGCG ATGGCAGTTG GGTACAGGTA CAAGCTGATA CGGTATGTGT TCATGGCGAT GGCGTACAGG CATTAGCGTT TGCGCGTTGT TTACGAGACC GTTTTCAGCA GGAAGGCATC AGCGTGATAG CGCAATAA
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Protein sequence | MKIDLNADLG EGCANDQALL QLVSSANIAC GFHAGDAQTM RQSVRWALEY GVAIGAHPSF PDRENFGRTA MQLPPETVYA QVVYQLGALA AIVQVEGGVM QHVKPHGMLY NQAAVDPLLA DAIAQAVKAV DPSLRLVGLA GSELIRAGTR VGLVTRQEVF ADRHYQPDGT LVPRSQPDAL IESDELALSQ TLAMVQQHQV QACDGSWVQV QADTVCVHGD GVQALAFARC LRDRFQQEGI SVIAQ
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