Gene YPK_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1162 
Symbol 
ID6090554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1301230 
End bp1301712 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content48% 
IMG OID641596230 
Producthypothetical protein 
Protein accessionYP_001719913 
Protein GI170023408 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGGAA CCGATCGGGC AGTTCACAGT AAAGAATATC GCTATGCGTG TGAGGAACTT 
GATGTTTTGT GTCGCGCTGG GGTGACCCGT GGCGGGTTGA TGGATTTTCA TCGTCGCTAT
AAGTTGGTCT TACTGGCGCA TTCTCAGCCT GAATACCGTG AAATCGGTCC TTTTATTGCG
GCAATCAGCA ACTGGTCATC CTTGAGCGAA TTTACGGCTG AATATCGTCG GCGCTTACTG
CATTTACTTT CTCACTTGCC CACGGTAGCC AATCACACCA ATGTGTTAAT GCACGTACAG
GGCTATTTTC GCCCTTATCT CAGTTCAGCT CAGCGTCAGG CATTGGCACA GCTTATTGAG
CAATACCGTT TAGGCAATCA GCCTCTGCAG GCTCCCATTG CACAAATCAC CGAGTATCTG
GCTGAGTTCC CCAATGATTA TCTGGCTCAG CAGCGCTATT TTTCTTTTTA TTTACAAGAT
TAA
 
Protein sequence
MPGTDRAVHS KEYRYACEEL DVLCRAGVTR GGLMDFHRRY KLVLLAHSQP EYREIGPFIA 
AISNWSSLSE FTAEYRRRLL HLLSHLPTVA NHTNVLMHVQ GYFRPYLSSA QRQALAQLIE
QYRLGNQPLQ APIAQITEYL AEFPNDYLAQ QRYFSFYLQD