| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1148 |
|---|
| Symbol | |
|---|
| ID | 6091199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1286026 |
|---|
| End bp | 1286787 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641596216 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001719899 |
|---|
| Protein GI | 170023394 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00261143 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAAT TACTTATTGT TAATGCTGAT GATTTTGGTC TGTGTAAAGG GCAAAACTAC
GGGATCATTG ACGCCTTCCG CAACGGCGTA GTCTCCTCGA CGACCGCAAT GATGAACAGT
GTGGATATTA ACCATGCGGC GGAACTCAGT GCGCAATATC CGGCACTGCC AGTGGGGATG
CATTTTGTAT TGACCTTCGG ACGCCCATTG ACCGCAATGC CTTCTTTAAC TGACGCGAAT
GGTGAACTGG GTAAATGGCT ATGGCAGCGT GCTGGAGCAG GGACATTGGA TCTGAATGAG
ATAGCGCAAG AGCTGGAATG CCAGTTCGAG CGGTTTAGTG CGGTCTTTGG CCGCCCTCCG
ACCCACATTG ACAGCCATCA TCACGTGCAT ATGTTGCCGC AGATTTATCC CTTAGTCGCC
GCCTTCGCCC GTGAAAAATC ACTCCCGCTG CGTATTGATC GACATGAAGT GCAGCAACAT
GGGCTCACTC TCGATAACCC ACGTAGTAGC GAGTGGTTTA ACGCTGGCTT CTATGGTGAG
AACTTATCAG AGCCGTCGTT CTTGCAGCTA CTGGAACACG CTGATCAACA AGGCGTTAAC
TCGCTGGAAA TTATGTGTCA TCCGGCCTTT ATCGATCAGA CGTTGATGAC CAGTGGTTAT
TGTTATCCGC GATTGACCGA GTTGGCGATT TTGACCTCTC CGACATTAAA GCCCGCTATC
GCGCAACGTG GTTATCGGCT GGGGTCGTTT TTAGATTGTT AA
|
|---|
| Protein sequence | MEKLLIVNAD DFGLCKGQNY GIIDAFRNGV VSSTTAMMNS VDINHAAELS AQYPALPVGM
HFVLTFGRPL TAMPSLTDAN GELGKWLWQR AGAGTLDLNE IAQELECQFE RFSAVFGRPP
THIDSHHHVH MLPQIYPLVA AFAREKSLPL RIDRHEVQQH GLTLDNPRSS EWFNAGFYGE
NLSEPSFLQL LEHADQQGVN SLEIMCHPAF IDQTLMTSGY CYPRLTELAI LTSPTLKPAI
AQRGYRLGSF LDC
|
|---|
| |