| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1125 |
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| Symbol | |
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| ID | 6087786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1264220 |
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| End bp | 1265797 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641596193 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001719876 |
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| Protein GI | 170023371 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0107082 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTAGAC GTCTATGGCT TCGAAACACC TTGGTGGCAA CTGCGTTATT GAGCGTTTTT
TCTGTCCCAG TGAGTGCCGC AACTCACACA TTGCAATTAG CTATCGGTGA TGAGCCGACC
GAAGGTTTTG ACCCCATGTT AGGCTGGAGT CACGGTAGCT ATCTATTACT TCACAGCCCG
CTACTGAAAC AAAATGAAGA TTTTAGTTGG GATAGTCTGT TGCTCAGCCA GTACCAGCCT
AGTGATGATG GAAAAACGTG GTTGCTGACA CTTAAGCCTG ACCTTAAGTT CTCAGATGGC
TCTCCTCTCA CCGCAAAAGA TGTGGCTTTT ACCTACAACA ACGCCGCGGC CAGTGGCGGG
AAAGTGGATA TGGGGAATTT CCTCAGCGCT GAAGTTATCG ATCCCCTCAA TGTCCGCATC
CACTTGAAAG CACCACAAAG TACATTTGTG AATGTGCTGG GTTCACTGGG CATTGTTTCA
GCCGATAAAT ACAATGCAAA AACCTATGCA CAAAAACCTA TTGGCGCGGG TCCCTATCGT
TTAGTGAGTT TCCAGCCGGG TCAGCAAATG ATCGTGGAAG CTAACCCTTA TTACGCGGGC
AATAAGAACG ATTTTGATAA ATTGATTTTT GTTTTCCTTG ATGAAGATAG TGCCTTCGCT
GCCGCGCAAA GTGGGCAATT AGGTGTCGTG CGTATCCCTC CCTCCATGGC AGTAGGTTCG
GTTAATAACA TGAAGTTATG GGTCCGGCCA AGCGTCGAAA ATCGTGGCAT TGTGTTCCCA
ACCACTCCTG CAGGCAAAAA AGACGCACAT GGTTACCCCA TTGGCAATGA TGTGACCGCC
GATGTTGCTA TCCGTCGTGC CATTAACTAC GCCATTAATC GCCAATTATT GGCCGATCAA
ATCATGGAAG GTCATGCTAT TCCGGCCTAT ACCGGAGTGC AGGGCTTGCC ATGGAATAAC
CCTGATTCAG CGATTAAAGA TGGTGATATT GATAAAGCTA AACAGATATT GGAGCAAGCG
GGCTGGCAGC TTAATAGCCA AGGCATCAGA GAGAAAAATG GCCTACCGGC TAAGATAACG
CTTTGGTATA CCAGCGGTGA TACCACCCGC CGGGATTTGG CACAGGCGTT ACGCTCGATG
TTGAAACCTA TCGGTATCGA TGTGGATTTA AAATCCGGCA GTTGGGAAAC GGTTGAGCGC
AATATGCATG CCAACCCAAC TTTATTTGGC TGGGGGAGTC TTGATCCTAT GGAGTTGTAT
CATCATTACA GCAGCAATGC GGCTGGTGTT GAATATTATA ACCCCGGTTA CTACAAGAAT
CCGATGGTCG ATAAACATCT GCAACAGGCG TTGGATGCAC CGACCTGGCA GCAAGCGGTA
CCCTTCTGGC AACAGGTGGA TTGGGATGGT ACGACCGGTG CCGGTATCCG TGGCGATGCT
GCGTGGGCAT GGTTGTTGAA CATCCAGCAT ACTTATCTGG CCAATAACTG CGTTGATTTA
GGTAAAGGAA CACCGGAAAT TCACGGCTCC TGGTCATTGC TCAATAGTAT TGATAGCTGG
AAATGGACCT GTCAGTAA
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| Protein sequence | MSRRLWLRNT LVATALLSVF SVPVSAATHT LQLAIGDEPT EGFDPMLGWS HGSYLLLHSP
LLKQNEDFSW DSLLLSQYQP SDDGKTWLLT LKPDLKFSDG SPLTAKDVAF TYNNAAASGG
KVDMGNFLSA EVIDPLNVRI HLKAPQSTFV NVLGSLGIVS ADKYNAKTYA QKPIGAGPYR
LVSFQPGQQM IVEANPYYAG NKNDFDKLIF VFLDEDSAFA AAQSGQLGVV RIPPSMAVGS
VNNMKLWVRP SVENRGIVFP TTPAGKKDAH GYPIGNDVTA DVAIRRAINY AINRQLLADQ
IMEGHAIPAY TGVQGLPWNN PDSAIKDGDI DKAKQILEQA GWQLNSQGIR EKNGLPAKIT
LWYTSGDTTR RDLAQALRSM LKPIGIDVDL KSGSWETVER NMHANPTLFG WGSLDPMELY
HHYSSNAAGV EYYNPGYYKN PMVDKHLQQA LDAPTWQQAV PFWQQVDWDG TTGAGIRGDA
AWAWLLNIQH TYLANNCVDL GKGTPEIHGS WSLLNSIDSW KWTCQ
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