Gene YPK_1118 details

Gene Information

• Locus tag: YPK_1118
• Symbol: nrdI
• ID: 6090330
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 1259296
• End bp: 1259700
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641596186
• Product: ribonucleotide reductase stimulatory protein
• Protein accession: YP_001719869
• Protein GI: 170023364
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG1780] Protein involved in ribonucleotide reduction
• TIGRFAM ID: [TIGR00333] ribonucleoside-diphosphate reductase 2, operon protein nrdI

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCGC TGGTTTATTT CTCCAGCAGC TCGGAGAACT CCCATCGTTT TGTCGAAAAG 
TTACAACTAC CCGCCATCCG GATCCCTATT GCCGGGGCGC GGGAAAAGCT ACGGGTTGAG 
CAGCCCTATA TTTTGTTGGT ACCTAGCTAT GGGGGGGGCA GCCCGGTTGG CGCGGTACCT 
ATTCAGGTCA TTCGGTTCCT GAACGATGTT CATAACCGTT CATTGATCCG CGGTGTTATT 
GCCGCGGGCA ACACTAATTT TGGCGACGCC TACTGTCTGG CGGGGGATAT TATCTCCCAC 
AAGTGTCAGG TTCCTTACCT GTATCGCTTT GAACTCCTAG GTACAGCAGA AGATGTGGCA 
AACGTTCGCA AGGGAGTAAC TGAATTTTGG CAACGACAAA ACTGA 

 

Protein sequence

MNPLVYFSSS SENSHRFVEK LQLPAIRIPI AGAREKLRVE QPYILLVPSY GGGSPVGAVP 
IQVIRFLNDV HNRSLIRGVI AAGNTNFGDA YCLAGDIISH KCQVPYLYRF ELLGTAEDVA 
NVRKGVTEFW QRQN