| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1116 |
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| Symbol | nrdF |
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| ID | 6090225 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1256086 |
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| End bp | 1257057 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641596184 |
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| Product | ribonucleotide-diphosphate reductase subunit beta |
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| Protein accession | YP_001719867 |
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| Protein GI | 170023362 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGTAG TAAAACCAAT AACACGTATC AGCGCCATCA ACTGGAATAA AATTGAAGAC
GATAAAGATC TGGAAGTGTG GAACCGCCTG ACATCTAATT TTTGGCTGCC GGAAAAAGTC
CCGCTGTCGA ATGATATTCC GTCGTGGGCG ACACTCACGC CACATGAACA ACAACTGACT
ATCCGGGTTT TTACCGGCCT CACGCTATTG GATACGATCC AGAATACACT GGGCGCACCT
GCATTAATTA AAGATGCGAT TACCCCCCAT GAGGAAGCGA TATTTTCAAA TATCAGCTTT
ATGGAGGCCG TACACGCACG TTCTTATAGC TCTATTTTTT CTACACTTTG TCTGACATCA
GATGTAGACG ATGCCTACCG TTGGAGTGAG GATAATGGGC CACTCCAAAA GAAAGCTGAT
ATTATTTCAC AGCATTACCA TAATGACGAT CCGCTGAAGA AAAAAATAGC CAGTGTATTT
TTGGAATCAT TTTTATTCTA TTCCGGATTT TATTTACCCA TGTATTGGTC CAGTAGAGCT
AAATTAACCA ACACCGCAGA TCTTATTCGG CTTATTATTC GGGACGAAGC TGTCCATGGA
TATTATATCG GCTATAAGTT TCAAAAGGGG TTGGGAAAAA TAGATAGTGC CCATCGTCAG
GAAATAAAGA ATTTCGCTTT CGACCTACTG CAAGATCTCT ATGATAATGA AGTGCGTTAT
ACCGAAGATC TGTATGACCA CGTTGGCTGG ACAGAGGATG TAAAAAAATT TCTCCACTAC
AATGCCAATA AAGCACTCAT GAATTTAGGC TATGAGGCAT TATTTCCCGC CAGCCAAGCG
GCGGTCAGCC CTGCAATTCT GGCCGCGTTG TCGCCAAACG CAGATGAAAA CCACGATTTT
TTCTCCGGAT CAGGTTCATC TTATGTGATC GGTAAAGCGG TCAATACTGA AGACGAAGAT
TGGGATTTTT AA
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| Protein sequence | MNVVKPITRI SAINWNKIED DKDLEVWNRL TSNFWLPEKV PLSNDIPSWA TLTPHEQQLT
IRVFTGLTLL DTIQNTLGAP ALIKDAITPH EEAIFSNISF MEAVHARSYS SIFSTLCLTS
DVDDAYRWSE DNGPLQKKAD IISQHYHNDD PLKKKIASVF LESFLFYSGF YLPMYWSSRA
KLTNTADLIR LIIRDEAVHG YYIGYKFQKG LGKIDSAHRQ EIKNFAFDLL QDLYDNEVRY
TEDLYDHVGW TEDVKKFLHY NANKALMNLG YEALFPASQA AVSPAILAAL SPNADENHDF
FSGSGSSYVI GKAVNTEDED WDF
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