| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1115 |
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| Symbol | |
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| ID | 6090542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 1254211 |
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| End bp | 1255410 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641596183 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_001719866 |
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| Protein GI | 170023361 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATTA AACTCGAAGT AAAGAACTTA TATAAAGTAT TTGGTGAACA TCCGGAACGG
GCTTTTAAAC TGCTTGAATC AGGTAAAAAT AAAGAGCAGA TATTTGCCAA AACCGGTTTA
TCCGTTGGTG TCAAAGATGC CAATCTGGCC ATTGAAGAAG GCGAGATATT CGTCATCATG
GGGTTATCCG GTTCCGGTAA ATCCACACTG GTACGCCTTC TCAATCGTCT GATAGAACCC
ACTCGTGGTG AAGTACTGAT CGATGGTGAA GATATTGCCA AAATATCTGA CAGTGCCCTG
CGCACCGTAC GCCGTAATAA GATCAGTATG GTATTTCAAT CCTTTGCATT AATGCCGCAT
TTAAATGTAT TAGATAATAC CGCATTTGGC ATGGAATTAG CGGGCATCCC ATTGCTGGAA
CGCAATGAAA AAGCATTAGA AGCATTGCGT CAGGTCAGTT TGGATAGCTA TGCCAATTCC
TATCCTGACG AACTTTCCGG TGGGATGCGC CAGCGTGTTG GCTTAGCCAG AGCAATGGCC
AATAATCCGG ATATCCTATT AATGGATGAG GCCTTTTCAG CCCTTGACCC CTTAATACGT
ACCGAAATGC AAGATGAGCT GGTCAAGTTA CAAGCCAAGC ATCAGCGAAC CATTGTTTTT
ATTTCCCATG ACCTGGATGA AGCTATGCGT ATTGGCGATC GTATTGCCAT TATGCAAGGT
GGTGAAGTTG TGCAAGTGGG GACACCGGAT GAGATCCTCA ATAATCCAGC CAATGATTAT
GTGCGTACCT TCTTCCGTGG TGTCGATATT ACTCATGTCT TCAGTGCCAA AGATATCGCC
CGCCGTCGTC CAGCTTCATT AATCCGTAAA ACACCGGGTT TCGGCCCGCG TTCAGCGTTA
AAACTGCTTC AGGATGAAAA CCGTGATTAC GGTTATGTGC TGGAACGCGG TCAAAAATTC
ATTGGCGTAG TATCGATAGA ATCACTGAAA AAAGCATTGG CAGAACATCA ACCGTTGGAT
AGCGCGTTGC TGGCTGAACC CGCACCTGTT CCTGCTGATA TGCCCCTCAG TGAGCTGATT
TCATTGGTGG CACAGGCTCC GTGTGCGGTC CCGGTGATCG GTGAAGACAG TAGCTATATC
GGTATTATTT CAAAAGCCAT GCTCTTGCAG GCCCTAGATA AGGAGACGCC AAATGAGTGA
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| Protein sequence | MAIKLEVKNL YKVFGEHPER AFKLLESGKN KEQIFAKTGL SVGVKDANLA IEEGEIFVIM
GLSGSGKSTL VRLLNRLIEP TRGEVLIDGE DIAKISDSAL RTVRRNKISM VFQSFALMPH
LNVLDNTAFG MELAGIPLLE RNEKALEALR QVSLDSYANS YPDELSGGMR QRVGLARAMA
NNPDILLMDE AFSALDPLIR TEMQDELVKL QAKHQRTIVF ISHDLDEAMR IGDRIAIMQG
GEVVQVGTPD EILNNPANDY VRTFFRGVDI THVFSAKDIA RRRPASLIRK TPGFGPRSAL
KLLQDENRDY GYVLERGQKF IGVVSIESLK KALAEHQPLD SALLAEPAPV PADMPLSELI
SLVAQAPCAV PVIGEDSSYI GIISKAMLLQ ALDKETPNE
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