| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1106 |
|---|
| Symbol | |
|---|
| ID | 6090782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 1245897 |
|---|
| End bp | 1246652 |
|---|
| Gene Length | 756 bp |
|---|
| Protein Length | 251 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641596173 |
|---|
| Product | hydroxyacylglutathione hydrolase |
|---|
| Protein accession | YP_001719857 |
|---|
| Protein GI | 170023352 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | [TIGR03413] hydroxyacylglutathione hydrolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTTA TCAGCATTCC GGCATTTCAA GACAATTACA TTTGGCTACT GGCTAATCGA
CAAAAACACT GTGTTATCGT TGACCCTGGT GAGTCAGCGC CAGTTCTAGC CACGCTGGCC
CAAGGCCAAT ATGTGCCACA AGCCATATTA TTGACCCATC ATCATAACGA TCACGTGGGG
GGGGTTGCTG ATTTACGCCA CCATTTCCCC GATATTCCCG TCTATGGGCC ACAAGAAACT
GCGAAAAAAG GGGCCACCGT CATTGTTAAT GATGGCGATA GCCTCACCAT TGCCGGACAA
AATTACACCA TTATAGCCGT CCCCGGCCAT ACTCTAGGTC ATATCGCATA CTACAGTTCT
CCTTATCTTT TTTGTGGAGA CACCCTGTTT TCTGCTGGCT GTGGGCGACT CTTAGAAGGT
ACACCAGAGC AAATGTACGC TTCAATTCAA CGACTCGCGC AGTTACCCGA CGAAACCTTA
ATATGCTGCG CACATGAATA TACTCTCTCA AATCTTAAGT TTGCCCACGC AATTTTGCCT
GCTGATCAAG ATATTGCTAC ATATCAACAA CAAATTGAGC AATTACGGTC AAAAAACCTA
CCTAGCCTGC CCGTAAAATT GCAATTTGAG CGCAAAATTA ATGTTTTTTT ACGTTGCAAT
GACATTGATT TACAAAGAAA AATAGGAATA ACTTCGCCTC CAGACTCACT TGTCTCTGTT
TTCTGCGAAT TACGCTCCCG AAAAGACAGC TTTTGA
|
|---|
| Protein sequence | MNLISIPAFQ DNYIWLLANR QKHCVIVDPG ESAPVLATLA QGQYVPQAIL LTHHHNDHVG
GVADLRHHFP DIPVYGPQET AKKGATVIVN DGDSLTIAGQ NYTIIAVPGH TLGHIAYYSS
PYLFCGDTLF SAGCGRLLEG TPEQMYASIQ RLAQLPDETL ICCAHEYTLS NLKFAHAILP
ADQDIATYQQ QIEQLRSKNL PSLPVKLQFE RKINVFLRCN DIDLQRKIGI TSPPDSLVSV
FCELRSRKDS F
|
|---|
| |