Gene YPK_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1104 
Symbol 
ID6089726 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1243642 
End bp1244403 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content49% 
IMG OID641596171 
Producthypothetical protein 
Protein accessionYP_001719855 
Protein GI170023350 
COG category[S] Function unknown 
COG ID[COG3021] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTATG TTGCAGGACA ACCGGTTGAA CAGATCTTCC CTGGCGCCGC TAAGCAACTC 
GATAAAGGCT TGCCGTTAGG CGAACCATTA CCTACAGCTG AACTTTTACG AGTGGTAGTG
TGGAATATCT TTAAGCAGCA GCGGGCTGGA TGGCTACCTG TACTTAAGGA ACTCGGGCGT
GATACTCAAC TGATGTTACT GCAAGAAGCA CAAACTACAC CTGAGTTGGT GAGGTTTGCG
ACTGCCAGCT ATCAGGCCGC AGATCAGGTA CCTGCTTTTT CATTGCCCCA GCACCCTTCT
GGTGTGATGA CGCTGGCTGC GGCTCATCCA GTATATTGTT GCCCTTTGCG TGAGCGTGAG
CCGCTACTGC GCTTGTCTAA ATCGGCTTTA GTTACTGTCT ATCCTATTCA TGATGGTCGC
TTGTTAATGG TGGTGAATAT TCATGCGGTA AACTTCAGTC TTGGTGTCGA TGTTTACAGC
AAACAGCTCG ATCCGATTGG TGATCAAATT GCTTCACATC GTGGCCCAGT TATTCTTGCG
GGTGATTTTA ATGCCTGGAG CCGCCAACGT ATTAATGCCT TGCAGCACTT TGCACAGGAC
GCTGGTTTAC AAGAGGTTGA ATTTCGCGTC GATCACCGCA GTCGTGCGTT CGGCCGGCCT
CTGGACTTTA TTTTTTATCG CGGCCTTACC GTTATTGATG CTTCAGTTTT AGTGACCAGA
GCCTCCGATC ACAACCCACT CATTGTCGAA TTCCAACCAT AA
 
Protein sequence
MRYVAGQPVE QIFPGAAKQL DKGLPLGEPL PTAELLRVVV WNIFKQQRAG WLPVLKELGR 
DTQLMLLQEA QTTPELVRFA TASYQAADQV PAFSLPQHPS GVMTLAAAHP VYCCPLRERE
PLLRLSKSAL VTVYPIHDGR LLMVVNIHAV NFSLGVDVYS KQLDPIGDQI ASHRGPVILA
GDFNAWSRQR INALQHFAQD AGLQEVEFRV DHRSRAFGRP LDFIFYRGLT VIDASVLVTR
ASDHNPLIVE FQP