Gene YPK_1095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1095 
Symbol 
ID6089017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1233381 
End bp1234034 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content46% 
IMG OID641596161 
ProductDL-methionine transporter permease subunit 
Protein accessionYP_001719849 
Protein GI170023344 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2011] ABC-type metal ion transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0123731 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGAGG CAATGATGTG GTTAATGGCT CGAGGCGTCT GGGAAACTCT TATGATGACT 
TTTGTTTCCG GTTTCTTTGG CTTTGTTCTG GGGCTACCTG TAGGGGTGCT GTTATATGTC
ACCCGTCCTG GGCAAATTAT CGCTAACAAT AAAATTTATA GAACGCTGTC TGGTGTGGTG
AATATTTTCC GCTCCATTCC TTTTATTATC TTATTGGTAT GGATGATTCC ATTTACACGC
ATGATCGTCG GCACATCGAT TGGATTGCAG GCCGCTATCG TGCCGTTAAC GGTAGGAGCC
GCGCCTTTCA TTGCCCGTAT GGTGGAAAAC GCTCTGCTAG AGATTCCGTC AGGTTTGGTT
GAAGCGGCAC GTGCGATGGG CGCAACACCG ATGCAGATCA TCAAAAAGGT ATTATTACCA
GAAGCCCTGC CCGGCTTGGT GAATGCGGCA ACGATTACAT TAATTACTCT GGTAGGCTAT
TCCGCTATGG GAGGAGCAGT AGGCGCCGGT GGCTTAGGTC AAATCGGTTA TCAGTATGGT
TATATTGGGT ATAACGCTAC GGTGATGAAT ACTGTATTAG TATTACTAGT AATTCTGGTC
TACCTAATTC AGTTAAGTGG TGATCGGATA GTCAAAGCCG TTACGCACAA ATAG
 
Protein sequence
MSEAMMWLMA RGVWETLMMT FVSGFFGFVL GLPVGVLLYV TRPGQIIANN KIYRTLSGVV 
NIFRSIPFII LLVWMIPFTR MIVGTSIGLQ AAIVPLTVGA APFIARMVEN ALLEIPSGLV
EAARAMGATP MQIIKKVLLP EALPGLVNAA TITLITLVGY SAMGGAVGAG GLGQIGYQYG
YIGYNATVMN TVLVLLVILV YLIQLSGDRI VKAVTHK