Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1088 |
Symbol | |
ID | 6087564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1227582 |
End bp | 1228130 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641596154 |
Product | YaeQ family protein |
Protein accession | YP_001719842 |
Protein GI | 170023337 |
COG category | [S] Function unknown |
COG ID | [COG4681] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.39244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCACTAA AAGCAACTAT CCATAAAGCC GCTATTAACA TTGCAGATAT GGACCGTAAT TTTTTCCAGG ATATTAACCT GACGATAGCG CAACATCCCT CGGAAACGGA TCAACGTATG ATGCTGCGTT TACTGGCATG GATTTGCCAT GCTGATGAGC GCTTGCTGTT TACCAAAGGA CTCAGTGCTG ATGATGAACC CGAAGTTTGG CGCCATAATG ACCACAACGG CATTGAGCTG TGGATTGAAT TGGGGCTACC TGAAGAGAAA CGGTTGCGCA AAGCCTGTAA TCAATCAAAA CAAGTCGTTC TGTATGCATA CAGTGAGCGT GCGGCCAAAG TCTGGTGGCC ACAAGTTCAG GAGAAACTCG CTGGGCATCG TAACTTAAGA GTGCGTTTTC TTGATGACGA ACAAATGGCG AAGTTGGCTG CGCTGTCTAA CCGCAATATG TCATTACAGG CGACACTGCA AGAAGGGACT ATCTGGCTAT CAGATGTACA GAATAATCTG GAAATTAGTT TTGCCGAATG GCAAAACTAC GGGCAATAA
|
Protein sequence | MALKATIHKA AINIADMDRN FFQDINLTIA QHPSETDQRM MLRLLAWICH ADERLLFTKG LSADDEPEVW RHNDHNGIEL WIELGLPEEK RLRKACNQSK QVVLYAYSER AAKVWWPQVQ EKLAGHRNLR VRFLDDEQMA KLAALSNRNM SLQATLQEGT IWLSDVQNNL EISFAEWQNY GQ
|
| |