Gene YPK_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1088 
Symbol 
ID6087564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1227582 
End bp1228130 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content46% 
IMG OID641596154 
ProductYaeQ family protein 
Protein accessionYP_001719842 
Protein GI170023337 
COG category[S] Function unknown 
COG ID[COG4681] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.39244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACTAA AAGCAACTAT CCATAAAGCC GCTATTAACA TTGCAGATAT GGACCGTAAT 
TTTTTCCAGG ATATTAACCT GACGATAGCG CAACATCCCT CGGAAACGGA TCAACGTATG
ATGCTGCGTT TACTGGCATG GATTTGCCAT GCTGATGAGC GCTTGCTGTT TACCAAAGGA
CTCAGTGCTG ATGATGAACC CGAAGTTTGG CGCCATAATG ACCACAACGG CATTGAGCTG
TGGATTGAAT TGGGGCTACC TGAAGAGAAA CGGTTGCGCA AAGCCTGTAA TCAATCAAAA
CAAGTCGTTC TGTATGCATA CAGTGAGCGT GCGGCCAAAG TCTGGTGGCC ACAAGTTCAG
GAGAAACTCG CTGGGCATCG TAACTTAAGA GTGCGTTTTC TTGATGACGA ACAAATGGCG
AAGTTGGCTG CGCTGTCTAA CCGCAATATG TCATTACAGG CGACACTGCA AGAAGGGACT
ATCTGGCTAT CAGATGTACA GAATAATCTG GAAATTAGTT TTGCCGAATG GCAAAACTAC
GGGCAATAA
 
Protein sequence
MALKATIHKA AINIADMDRN FFQDINLTIA QHPSETDQRM MLRLLAWICH ADERLLFTKG 
LSADDEPEVW RHNDHNGIEL WIELGLPEEK RLRKACNQSK QVVLYAYSER AAKVWWPQVQ
EKLAGHRNLR VRFLDDEQMA KLAALSNRNM SLQATLQEGT IWLSDVQNNL EISFAEWQNY
GQ